| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3031 |
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| Symbol | |
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| ID | 5613324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3662071 |
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| End bp | 3663123 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933968 |
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| Product | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
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| Protein accession | YP_001474763 |
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| Protein GI | 157376163 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | [TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.111205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0113432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTC TAATCCCTTT GAGTTGCGCG TTTTTCGTTT CGTTTATGGC GATACGCTGG
GTTATCCCCG TCGCGGAAAG ATTTGGCCTA GTTGATGTAC CTGCTGGTAG GAAGCAACAC
GATGGAAAAG TTCCGCTTAT TGGCGGCTTT GCCATCTACC TGAGTGTTTT AACAACAAGC
ATGATGTTCA TTCCCAATAG CCAGGCACTC AATATCTATC TGGTGTCGGC GTCCTTGATC
CTTTTTATCG GAGTATTAGA CGATAAATAC GATATTCCGG TCAGGTATCG TTTAGCGGCT
CAGGTTATCA TCGCCTCTAT GATGATCTTC GGTGCTGGTC TATATCTCAA GGATTTAGGT
AATCTGTTAG GCTTTGGGCT TATCTCACTT AGTTTTGTAG GCGTCTTTGT TACGGTTATC
GCGGTTATCG GGGCGATTAA CGCCTTCAAT ATGGTCGATG GTATCGATGG CCTTGCCGGA
ATGCTCAGTC TAATAACCTT TGCCGGGTTA GCTTTCCTGT TAAGCCGTGT AGGCAGTGAC
TGGTACCTCT TACCCCTCCT GTTTATTGCC TCATTGGTTG CTTACTTAAT GTTTAATTTA
GGTTGGCCGA CTAAGATATT ACGCAAAGTT TTTATGGGTG ATGCCGGTAG TATGCTTATT
GGTTTAACGG TTGTCTGGCT ACTTGTTATC GGGGTCGATG ATGGTGTAGA TGCTTTTAGG
CCGGTTACAG CACTTTACTT GATAGCTATC CCCTTAATGG ACATGGCTGC AATTATGTTC
AGAAGGATCA ATAAAGGTGA ATCACCTTTC AAACCCGATC GTGACCATCT GCATCATATT
TTTATGCGCG CAGGGTTTAC GCCAAGGCAG TCATTGGTCA TTATTAGCCT ATGTGCCAGC
TTGTTCACCT TTGTTGGCGT ATTATCTGAA CTTTATCATG TTCCTGAAGT CATCATGTTT
ATCGGTTTTA TTATGATCTT TGGACTCTAT AGTTATGCCA TTCAGCATGC CTGGCAGATA
TTGTCGTGGT TCAGAAGTCA ATTTTATTCA TAG
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| Protein sequence | MDFLIPLSCA FFVSFMAIRW VIPVAERFGL VDVPAGRKQH DGKVPLIGGF AIYLSVLTTS
MMFIPNSQAL NIYLVSASLI LFIGVLDDKY DIPVRYRLAA QVIIASMMIF GAGLYLKDLG
NLLGFGLISL SFVGVFVTVI AVIGAINAFN MVDGIDGLAG MLSLITFAGL AFLLSRVGSD
WYLLPLLFIA SLVAYLMFNL GWPTKILRKV FMGDAGSMLI GLTVVWLLVI GVDDGVDAFR
PVTALYLIAI PLMDMAAIMF RRINKGESPF KPDRDHLHHI FMRAGFTPRQ SLVIISLCAS
LFTFVGVLSE LYHVPEVIMF IGFIMIFGLY SYAIQHAWQI LSWFRSQFYS
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