| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3030 |
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| Symbol | |
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| ID | 5613323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3661605 |
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| End bp | 3662024 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933967 |
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| Product | general secretion pathway protein G |
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| Protein accession | YP_001474762 |
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| Protein GI | 157376162 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.187173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00937307 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTAAGA TAAGCAGTTT GTTACGTAGA AAAAACTCAG GCTTTACGCT AGTTGAGCTA
CTTATTGTCA TTACTATCTT GGGACTACTG ATGTCTCTGG TAGCACCCAA AATGTTCAGT
AAGGTTAGTT CAACTCAGCG CAGTACCGCA GTTGCTCAAA TGCAAAACCT CGAAACATCA
CTCGATACAT ATAGATTAGA TGTAGGCTCT TATCCGGCTA ACCTGCAAGA GCTAAGAAGT
TCAACCAAAC GCGGTTGGGA TGGCCCGTAT TTGCCAAAAG ATGTGCCATT AGATCCTTGG
GGGAATCCAT ACCAATATGA ATCTCCAGGA GAAGGTGGTT TACCTTATTC TCTGAGATCT
TTAGGTAAAG ACGGCCAAGT TGGCGGCACA GACGATAACG AAGATATTAT CCACCAATAA
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| Protein sequence | MVKISSLLRR KNSGFTLVEL LIVITILGLL MSLVAPKMFS KVSSTQRSTA VAQMQNLETS
LDTYRLDVGS YPANLQELRS STKRGWDGPY LPKDVPLDPW GNPYQYESPG EGGLPYSLRS
LGKDGQVGGT DDNEDIIHQ
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