| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3004 |
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| Symbol | |
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| ID | 5610405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3635322 |
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| End bp | 3636518 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640933941 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474736 |
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| Protein GI | 157376136 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.978043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.100274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATA AAAAAACAGT ATATTTTCAT ATCGGCTACC ATAAAACAGG TACGTCAGCT
ATACAATCAT TTTGCTCGGC AAATCAAAGT GAATTGGCAC GCAAAGGTTT CTTATACGCA
GAAACAGGAA GAGCAGGGGC CGCACACGGG CCATTAGCAA ATTGTTTGAA AGCTTCCAAT
AAAAACCTTG ATCCTAATTT GCTTTATGCC AGCCTGAAAA AAGAAATTGC CAATTCAAAT
GCTCAAAGTG TAATTATCAG CTCGGAATGC TTTTTAGAAC AAATACCATT AGATAGAATT
GAACCATATT TAAAAAAATT GAATGCCCAT ATTAAAATTA TTGTCTATGT GAGGAGGCAA
GATGAGTGGG CACAGTCGGT CTATAATGAA ATCATTAAAG ATTCATCAAG GCGTTATACT
GGCAGTATTC TACATATGAG AGAAATTCGT ATGGGGTGGT TGAATTATAA TAATGTTATA
TCTCAATGGG AAAATGTCTT TGGCAGTGAA AATATTATTG TTCGGCCCTA TGATAAAGCA
CAAATGCGAA ATGGGCTTTA TGCAGATTTT TTATCGATAT TTAATATCGA TAATGTTTGC
GACTTTGAGA ATCCTGTAAC TGGAAAGGCT ACTAATCAAG GGCTTTCTGA AGATGTAATC
CTCGTGCTGA GGGCGCTAAA CGAAGTGCCA ATGATTCGTG ATATGCATAA AGAAATGGTT
AGCTACCTTA TAGATATCTC CCATAACTCA GAAGAAAAGA AACTAGGCCG AAACTATAAG
ATTCTTACCT TTTCAGAAAA GTCTGAATTG ATTAGCTCTT GCAAGCAGAG TAATGATATT
TTAGCTGAGA AATTCTTAAA TTGTAACACT TCATTGTTTT GTACAACTCT TGTGGAAAAC
AAGGATGATA AATCTCCAGT AGAGATGTTA TCTATTGAAA GGCAATGGCA GATTTACAAC
CAACTTCCCT TACATATCAA AAAGCATATT GAACGATTTA GGCCGCTGTT TGCCCAATCA
GAACAATCTA AACCATTTGT TTATGATGTT AATAATAATG AAATTGAGCG TCTTAGATTA
GTTATTCAAC GACAAAGATT AGAGCTAAAC TGGCTCTATG AAGATAATAC ACTTGGGTCT
ATTCGCAAGG AGGGGCTTGG TGTTCTATCG AAGTTTTTTG CTAAGTTATT TAAATAA
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| Protein sequence | MTNKKTVYFH IGYHKTGTSA IQSFCSANQS ELARKGFLYA ETGRAGAAHG PLANCLKASN
KNLDPNLLYA SLKKEIANSN AQSVIISSEC FLEQIPLDRI EPYLKKLNAH IKIIVYVRRQ
DEWAQSVYNE IIKDSSRRYT GSILHMREIR MGWLNYNNVI SQWENVFGSE NIIVRPYDKA
QMRNGLYADF LSIFNIDNVC DFENPVTGKA TNQGLSEDVI LVLRALNEVP MIRDMHKEMV
SYLIDISHNS EEKKLGRNYK ILTFSEKSEL ISSCKQSNDI LAEKFLNCNT SLFCTTLVEN
KDDKSPVEML SIERQWQIYN QLPLHIKKHI ERFRPLFAQS EQSKPFVYDV NNNEIERLRL
VIQRQRLELN WLYEDNTLGS IRKEGLGVLS KFFAKLFK
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