Gene Ssed_2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2989 
Symbol 
ID5610501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3621109 
End bp3621258 
Gene Length150 bp 
Protein Length49 aa 
Translation table11 
GC content38% 
IMG OID640933929 
Producthypothetical protein 
Protein accessionYP_001474724 
Protein GI157376124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.969643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAGAAG ATGACTTCGA TTTGTTTTTA AGGGTTTTAG CCGATGTCTG TCAACGTTAT 
AACTGGGTAG TTCGTGCTTA TTGTTTGATG ACCAATCATT ATCATCTTTT GCTGGTGACT
CTCTCATGCA GTAATGCAGT AATGCAGTAA
 
Protein sequence
MQEDDFDLFL RVLADVCQRY NWVVRAYCLM TNHYHLLLVT LSCSNAVMQ