| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2978 |
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| Symbol | |
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| ID | 5610554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3606158 |
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| End bp | 3607231 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933918 |
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| Product | glycosyltransferase-like protein |
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| Protein accession | YP_001474713 |
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| Protein GI | 157376113 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATA AAGTCATCAT TGTAGGTACG CACACTACTG AAACTCGTGG TGGAATAAGC
ACGGCGCTAG CGGGCTATCA GGACGGCTTA AACCAGCTCG AAGTTGAATA TATAAGGGTA
AACTCTCATA GCGATATTCG TGGTCGTTTA TCTACCTGGA TAATCGCCTG GTGGCAGGTT
CTTCTATTAG CCATGCGATA CCGTTCGAGG GCCATATTTT GGTTTCACTG TGGTCCTTGG
TTTTCAATGC TGCGGAAGGT GAGCTTTGCC ATTCCTGCGA GGCTCTTTGG TTGTAAAACC
ATTGCTCATA TGCATTCTCC TACATTGCAT AGCTATATAG AACACAAGCA TGGCAAGTAT
TTACTTAAGT TATTTTTCGC TCCTTTTAAC TGCGTGATCG CACTCACTCC CTGGTGGAAA
GCCCGGTTAG TTTCATTCGG CATCAAGAAG CCAATAGATG TGTGTGCTAA TCCTGTGTCT
GAAGATGTCT TATCTGTGGC CAATAAAGCG TTGTCGGTGC CGGGTTGTGC GAGTGAGAAA
GCAGAGAAAA TTGTTATCTT ATCGATGGCC AGGTTAATAG AGGGAAAGGG GGTTGAGCAT
GTTATCGATG CACTGGCACT ATTACCTGAG TGTTATCAGT TGAATATTGC CGGTGAAGGC
CCTTTAAAGC AGCAACTGAT TGATCGGGTT ACCTTGTTAA AACTCCAAAA TAGAGTGACT
TTTCTCGGTT GGGTGGAGGC TTCCCAGAAA CAAAACTTGC TGAATAGTGC GGATATATTC
TGTTTACCCT CCAAGTATGA TTCATTTGGT GTCGTTTTTA TCGAAGCTAT GGCGTTTAAC
TTGCCTGTCA TTGCGTGCGA TTGGGGCCCT ATCTCTGATG TCGTGACATC AGATGTTGGC
ATGTTAGCCC CTTATGGCGA ATCAACGACT ATCGCTACTC AGATAGAGCA GCTGGTTAAG
CGAAGAGAAG ATTATAGCCT TAACGGGCCC AAGCGAATAA TTGCTAATTA TTCGTCATCG
ATTTGTTGTC ATAAAGTCAT GCAGGTATTC GATAGGTTAA TGAGTGGGCA TTAA
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| Protein sequence | MNHKVIIVGT HTTETRGGIS TALAGYQDGL NQLEVEYIRV NSHSDIRGRL STWIIAWWQV
LLLAMRYRSR AIFWFHCGPW FSMLRKVSFA IPARLFGCKT IAHMHSPTLH SYIEHKHGKY
LLKLFFAPFN CVIALTPWWK ARLVSFGIKK PIDVCANPVS EDVLSVANKA LSVPGCASEK
AEKIVILSMA RLIEGKGVEH VIDALALLPE CYQLNIAGEG PLKQQLIDRV TLLKLQNRVT
FLGWVEASQK QNLLNSADIF CLPSKYDSFG VVFIEAMAFN LPVIACDWGP ISDVVTSDVG
MLAPYGESTT IATQIEQLVK RREDYSLNGP KRIIANYSSS ICCHKVMQVF DRLMSGH
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