| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2975 |
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| Symbol | |
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| ID | 5613548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3604078 |
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| End bp | 3605031 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933915 |
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| Product | chain length determinant family protein |
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| Protein accession | YP_001474710 |
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| Protein GI | 157376110 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.978239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAGTG AAATTGAACG ATTGAATTCA AATACTGAAG TGGTCTCTTT TAAGGCCATG
TTTGCCATGT TGTGGCGAAC TAAATGGTTC ATCATTGTTT TTACCGGTCT AATATCTGTG
GCGACGGTCA TATACGCCAT TAATGTGCCA AATGTATACC GTGCCTCTGC TATTTATTTA
CCTAAAAGTA GCGATGATGC CGGCGGGCTT GCTCAGTTAG CTGGTCAATT CGGTGGTCTT
GCGAGCATGG CGGGAATCAA CTTAGGTGGT GGGGGAGCCG ACAAAACAGC CGCTGCAATA
GAGTTTATGA AGTCACGTGC TTTTTTACAG GCTTTCATTG ATAAACGCGA CTTAACTGTT
CCTATTTTGG CCGCTAAAGG TTGGGAACAG GAGTCAGGAA ACCTTTTGAT CGATCCTGAA
CTATATGATG AGAGTAAACA AGTTTGGGTT AGAGCGGCAC CTCCAGGCTT TCAGGTTACT
CCCACAGCTT GGGAAGCCTA TGATCTATTC AGGAAGATGA TCAGTATTTC GGAGCAGTCT
AAAAAGGGCT TCGTAAAGAT TGAACTTGAA TACTATTCAC CTGACTTAGC CGCTAAGTGG
TTGGGATGGT TAGTGGAAGA CCTAAATGCT TACTGGAAAA CCAGAGAGCA TGAGCAGACT
CAGAAGAGCA TCGCATTTTT AACTAAACAG GCCGAGAATG CTCAACTTTC AGAACTTAGA
TCTGTTTTTT ATCAGCTCAT TGCCGAGCAA ACTAAAAACA CGGTCTTAGC TGAAGTCAGC
GATGAAGTCT TATTCGAAAC AATTGCTCCT ATCGTTGTTC CTGAGCAAAA GAGTGCACCT
TCCAGAGCCC TGCTCTGTCT GCTAGGTTTC GCATTAGGAG GAGTTTTATC TTGCATATTA
GGTCTGTTCT ATTGTGCGAT AAGGCCAGTT GCACCGTCTA GTTATAAATA TTGA
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| Protein sequence | MSSEIERLNS NTEVVSFKAM FAMLWRTKWF IIVFTGLISV ATVIYAINVP NVYRASAIYL
PKSSDDAGGL AQLAGQFGGL ASMAGINLGG GGADKTAAAI EFMKSRAFLQ AFIDKRDLTV
PILAAKGWEQ ESGNLLIDPE LYDESKQVWV RAAPPGFQVT PTAWEAYDLF RKMISISEQS
KKGFVKIELE YYSPDLAAKW LGWLVEDLNA YWKTREHEQT QKSIAFLTKQ AENAQLSELR
SVFYQLIAEQ TKNTVLAEVS DEVLFETIAP IVVPEQKSAP SRALLCLLGF ALGGVLSCIL
GLFYCAIRPV APSSYKY
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