| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2938 |
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| Symbol | |
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| ID | 5610960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3554237 |
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| End bp | 3555700 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933878 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474673 |
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| Protein GI | 157376073 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA AGATACTATC CGGATTATTA CTATTAAGTT GCAGCTCAGT ACAAGCTGCA
TGGTGGGTTG AGCCCGATGA CTTAGCACTG AGAGCCGATA TACAGCTGCT TTCCGATACA
GGTGTTATCG TGCAACCCAT TACAACCTAC CCATTGATGT GGGCGGGTTT AAAGCAAGAC
ATGGATAAGG CCGATATCAG CCAATTACCA AAAAACCAGG CGATGGCATT TGAAAGAGTC
ATGAACGCCT ACAAGCATGA CCATCAAAGC TTCAACAGCA AGGTAGAGGT CGCAGCGGCC
ACTGATACAG CGCGCTTTAT TGGTTTTGGT CAGGACTACC GCGACAAGGC GGAAACGACA
GTCAATGCCG AGGTCACTAA AGATTGGTTC AGTGGACGCG TCTCGGCCAG CTATCACTAC
GACCCTATCG ACGGTAACAA CGCAAGATTA GATAATAGTT TTGCCGCCGT CATGCTAGGC
AACTGGATAG TCAGCGCTGG TGCACAACAA AAATTCTGGG GACCGGGCTG GGATACGGGA
TTAATACAAA CCACCAACGC TCGCCCCATG CCAGGTATCA CCCTAAGCCG AAATAACAGC
CAGGCTTTCG AAACACCATG GCTTAACTGG GCAGGTCCCT GGACCTTTAC CACCAGCTTC
AGCCAGATGG AGAGTGACCG CTATGTCCCC GAGGCCAAAC ATTGGGGCGC TCGCGGAACC
CTGCGTCCAA TATCTAAACT CGAGGTCGGC TTCTCATGGA CCATGCAGTG GGGCGGCGAA
GGCTACGGTA ATAGCTTAGG CGACTGGTGG GATGGTCTGT TTAATGGCGG CGGAGTCGAA
GGTGACCTGG AAAACGGTCA GGAGAACATG TTAGCTGGCT ATGATTTCCG TTGGTCAGAT
ACCGCTTTCG GGATCCCGTA TGGGATCTAC TATGAGCGTA CTCATGAAGA TTATCATACT
GAAAAGCACA AACTCATTAA CGCATCCAAT ATGGGCGGTA TCGATTTTGT GTTGAGTGAC
ATCAATACTC GTGTGTTTAT CGAATATGCC GATACCACGG CCTCATGTGG ACCAAATGAT
AAGATATACA ACTGCATGTA CGAGCATGGT TTCTACAAAG ATGGTTATCG TTACTATGGT
AAGAGTCTGG GCAGCACCTA CGACAATGAC TCCCGTACTT TAGTTATCGG TGGGATCACT
CAACTGGGAG GTGGTCAGAA CATCACCAAC AAACTGAGAT GGCTTAAGCT CAATATCGAT
GGTAGTGATG TCGCATCTCC CGGTGGAAAT CCGGTATCAC ACGGCGAGTA TGAACAGATG
TATCAGTTTG ACACCAGCTA TCACCGTCCT TTCTATCAAG GAACCTTGAA GCTTGGTGGC
ACCCTGGGCT ATAGCAAGTA TATGACGTCC GGTGGCAACG ACTGGGATGG CACGGTATAC
GCGGGTTGGG AAAGAAGTTT TTAG
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| Protein sequence | MKFKILSGLL LLSCSSVQAA WWVEPDDLAL RADIQLLSDT GVIVQPITTY PLMWAGLKQD
MDKADISQLP KNQAMAFERV MNAYKHDHQS FNSKVEVAAA TDTARFIGFG QDYRDKAETT
VNAEVTKDWF SGRVSASYHY DPIDGNNARL DNSFAAVMLG NWIVSAGAQQ KFWGPGWDTG
LIQTTNARPM PGITLSRNNS QAFETPWLNW AGPWTFTTSF SQMESDRYVP EAKHWGARGT
LRPISKLEVG FSWTMQWGGE GYGNSLGDWW DGLFNGGGVE GDLENGQENM LAGYDFRWSD
TAFGIPYGIY YERTHEDYHT EKHKLINASN MGGIDFVLSD INTRVFIEYA DTTASCGPND
KIYNCMYEHG FYKDGYRYYG KSLGSTYDND SRTLVIGGIT QLGGGQNITN KLRWLKLNID
GSDVASPGGN PVSHGEYEQM YQFDTSYHRP FYQGTLKLGG TLGYSKYMTS GGNDWDGTVY
AGWERSF
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