| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2936 |
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| Symbol | |
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| ID | 5610958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3552166 |
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| End bp | 3552921 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933876 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474671 |
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| Protein GI | 157376071 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1434] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0201692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTTGGC TAAAAAAAAT AATTTCTCAG CTCTTTATGC CTGTGCCTCT GTTGGTGCTA
TTACTGTTAT TTGCGCTCTT GATATTACGC AACAGGAAGT TAGTTCGTTC AATCCTGTCA
GTTGCTATTG TGTTACTGGT ATTTCTCAGT AGTACCCCTG GCAGTAATTT TCTGAGCTCC
CCGCTGGAGA GTCAATATCA GGTTAATAGT GCTCCTATTG CCGATGCCTG TTTGGTTATG
GTTTTGGGCA GTGGTCATGA TGATTCGATA TCTGGAACGG CCATTCAGCA GCTTTCATCT
ACGGCGCTCG CCAGATTAAG TGAAGGGATG CGCCAGTTTA ATCTTGGGAG AGACTGTAAG
TTAGTATTTA GTGGTTGGAA TGGCGGTACC GGATTACATT CTCATGCTGA GGTGATGGCT
GCAGCTGCAG TAGAGCTGGG TATCCCTAAA AACCGTATTA TCACCTTCCC GCTGGCAAAG
GACACCATCG AAGAGGCACA ATTTATGAAA TGGGAAATCG GTAATGTTCC CTTTAGGTTG
GTCACTTCAG CCAGCCATAT GCCCAGATCT ATGTCGACAT TTGCAAATAT TGGGTTAACG
CCACAAGCGG CTCCGACAGA TTTTATAACC AGAGAAGGCT ATTGGTGGCG ACTGGATGCA
CATAACTTGT GGTCTTCTCA AAGAGCGATA CATGAATACG TTGGCAAGCT TTGGTTTCAG
ATAAAGCATC ACAGAGATAT CGAACTGTCT AATTAA
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| Protein sequence | MFWLKKIISQ LFMPVPLLVL LLLFALLILR NRKLVRSILS VAIVLLVFLS STPGSNFLSS
PLESQYQVNS APIADACLVM VLGSGHDDSI SGTAIQQLSS TALARLSEGM RQFNLGRDCK
LVFSGWNGGT GLHSHAEVMA AAAVELGIPK NRIITFPLAK DTIEEAQFMK WEIGNVPFRL
VTSASHMPRS MSTFANIGLT PQAAPTDFIT REGYWWRLDA HNLWSSQRAI HEYVGKLWFQ
IKHHRDIELS N
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