| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2933 |
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| Symbol | |
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| ID | 5610903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3550253 |
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| End bp | 3550741 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933873 |
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| Product | ferredoxin-type protein NapF |
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| Protein accession | YP_001474668 |
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| Protein GI | 157376068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00402] ferredoxin-type protein NapF |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000053627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATA TAAACCAGAG TCGCCGTCGA CTGTTTAGCC GAAGAAAATC AAATGCAATC
AGGCCCCCGT GGAGCAGACA GGATATCGAA TTTACCGATA TCTGCACCCG TTGCGACAAA
TGCATTCAGA CCTGTGAAAC AAAAATTATT TTCAAGGGCG ATGGCGGGTT TCCCGAAGTC
AACTTCTCCA TCGATGAATG CACCTTTTGC CAGAAGTGCG TCGAGGCATG CCCCGAGCCA
TTGTTTACAG CTACAGATGA CTCCCCATGG CAAATAGCGG CCACAATTAA TGATACTTGT
CTCGCCCTTA ATGAGATCTG GTGTCAGAGC TGTAAAGATG CGTGCGACCC ACGAGCCATC
AGTTTTATCC CCGCTATTGG TAAAGCCCCT CAACCACAGA TAGATACCGA TATCTGCAAC
GGTTGCGGTG CCTGTGTAGC CCCCTGTCCC AGTCATTCAA TTACCCTACT TGATAAGAAA
AAGCTGTGA
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| Protein sequence | MSDINQSRRR LFSRRKSNAI RPPWSRQDIE FTDICTRCDK CIQTCETKII FKGDGGFPEV
NFSIDECTFC QKCVEACPEP LFTATDDSPW QIAATINDTC LALNEIWCQS CKDACDPRAI
SFIPAIGKAP QPQIDTDICN GCGACVAPCP SHSITLLDKK KL
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