| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2931 |
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| Symbol | |
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| ID | 5609863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3548201 |
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| End bp | 3549121 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933871 |
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| Product | UTP--glucose-1-phosphate uridylyltransferase |
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| Protein accession | YP_001474666 |
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| Protein GI | 157376066 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1210] UDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01099] UTP-glucose-1-phosphate uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000109311 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATCAC ATAGAATTCG TAAAGCCGTT ATCCCCGTTG CGGGACTGGG AACAAGGATG
CTTCCGGCCA CTAAAGCTAT TCCCAAAGAG ATGCTGCCAG TCGTCGATAA ACCCTTGATA
CAGTATGTTG TTAATGAAGC CATTGCGGCC GGTATCAATG AGATAGTATT AGTTACCCAT
GCCAGTAAAA ACCCCATAGA AAACCATTTC GACACGAGTT TTGAGCTCGA AGCTCAGCTA
GAGCGCCGTG TTAAACGTCA GCTACTCTCA GAGGTTCAAT CCATTTGCCC CAAAGGAGTT
ACGGTTATCA GCGTGCGTCA ATCTCAGGCT AAGGGCTTAG GACACGCCAT TTTATGTGCC
AAATCCGTCG TAGGCGAGGC TCCCTTTGCC GTGTTACTGC CGGATGTCAT CGTCGATGAA
GCCAGTTGCA ACCTCAATAG AGACAATCTG GCAGAGATGG TCAAGCTGTT TGAGCAAACA
GATACCGGAC AGATAATGGT GGAAGGCGTG CCGGAAGATC AGGTTAACCA ATATGGTATC
GCCGATGTTA ACGGGCTAGA ACTTCAACCC GGAGAGTCTA AGCCATTGGT TCAACTGGTA
GAAAAACCCA GTATAGATGA GGCACCATCA AACCTTTCCG TTGTGGGCCG TTACATATTA
CCCGCAGATA TCTGGCCACT ATTGGCTAAG ACGCCCGCCG GAGCCGGCGA TGAGATACAG
TTAACCGATG CCATCGCCAT GATGATGGAG AAGAAGACGG TTAATGCCTA CTACATGAAA
GGTAAGAGCC ACGACTGCGG TAATAAGCAA GGTTATATGC AAGCCAGCGT CGAACACGCC
CTGCGTCATA AAGAGATTGG AACTGATTTC AAAAATTACC TGAGAAAGCT GGTAGAAGAC
TTCGATAAGG ATATGAATTA A
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| Protein sequence | MKSHRIRKAV IPVAGLGTRM LPATKAIPKE MLPVVDKPLI QYVVNEAIAA GINEIVLVTH
ASKNPIENHF DTSFELEAQL ERRVKRQLLS EVQSICPKGV TVISVRQSQA KGLGHAILCA
KSVVGEAPFA VLLPDVIVDE ASCNLNRDNL AEMVKLFEQT DTGQIMVEGV PEDQVNQYGI
ADVNGLELQP GESKPLVQLV EKPSIDEAPS NLSVVGRYIL PADIWPLLAK TPAGAGDEIQ
LTDAIAMMME KKTVNAYYMK GKSHDCGNKQ GYMQASVEHA LRHKEIGTDF KNYLRKLVED
FDKDMN
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