| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2927 |
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| Symbol | |
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| ID | 5613507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3543723 |
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| End bp | 3544709 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933867 |
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| Product | fumarylacetoacetate (FAA) hydrolase |
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| Protein accession | YP_001474662 |
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| Protein GI | 157376062 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAG CCAGTTATAA CAATGGTCGT CGCGACGGTC AGTTGATGTT AGTGAGTAAA
GATCTATCTA AAGCTGTGGC TGTCCCCGCC ATTGCCCATA CCATGCAGCA GTTGCTCGAT
ACATGGGAGC TGCTTCAGCC ACAACTGCAA GAGTTGTATG AAGCGTTAAA TGACGGTTTG
ATTGACAGTG CTGTCGATTT TGATGAAGCG AAGTGTTTGT CTCCTCTGCC GCGCGCCTAT
CAATGGGCTG ACGGTAGTGC CTATGTCAAT CACGTCGAAC TCGTACGTAA GGCCAGGGGC
GCACAGATGC CAGAGACATT CTGGACCGAT CCTTTAGTTT ATCAAGGTGG CTCCGACTGT
TTTATCGCGC CTAAGGCCGA TATCCCATTG GCGAGTGAAG AGTGGGGCAT CGATTTTGAG
TCTGAAATCG CGGTGGTCAC CGATGATGTG CCTATGGGCG TTACAACGCA GAATGCCGAA
AAGCACATTA AACTGTTAAT GCTTGTCAAT GATGTTTCGC TGCGTAACCT AATTCCGGGT
GAGTTAGCGA AAGGGTTTGG TTTCTATCAA GCCAAACCGT CGAGCAGCTT CTCTCCGGTC
GCGGTGACAC CGGAAGAGCT GGGTGCGCGC TGGGAAGACT CTAAGGTACA TCTACCTTTA
ATCACCCATC TGAATGAGTC CCTCTTCGGT CGCCCTAATG CTGGCGTCGA TATGACGTTT
AACTTCAGCC AACTAGTCTC TCATGTGGCC AAAACTCGCC CCTTAGGCGC CGGTGCCATC
ATAGGTTCAG GTACTATCTC CAATTATGAC CGCAGTGCCG GTTCAAGTTG TTTAGCCGAA
ACGCGAATGT TGGAAACGAT AGCCGAAGGC AAGCCAACGA CCTCATTTAT GAAATTTGGC
GATCGTGTAC GTATTGAGAT GCTGGATGAT AACCAAAAGA CTATTTTTGG CTCCATCGAT
CAGCAAGTTG TCGAGTATAA AGGGTAA
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| Protein sequence | MKLASYNNGR RDGQLMLVSK DLSKAVAVPA IAHTMQQLLD TWELLQPQLQ ELYEALNDGL
IDSAVDFDEA KCLSPLPRAY QWADGSAYVN HVELVRKARG AQMPETFWTD PLVYQGGSDC
FIAPKADIPL ASEEWGIDFE SEIAVVTDDV PMGVTTQNAE KHIKLLMLVN DVSLRNLIPG
ELAKGFGFYQ AKPSSSFSPV AVTPEELGAR WEDSKVHLPL ITHLNESLFG RPNAGVDMTF
NFSQLVSHVA KTRPLGAGAI IGSGTISNYD RSAGSSCLAE TRMLETIAEG KPTTSFMKFG
DRVRIEMLDD NQKTIFGSID QQVVEYKG
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