| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2922 |
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| Symbol | |
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| ID | 5610258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3535889 |
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| End bp | 3536524 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640933862 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001474657 |
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| Protein GI | 157376057 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.538329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAATA ATGTTCAGTA CGGCTTTTAT GTCGATTCAA GTAAGTGTAC GGGTTGTAAG
ACCTGTCAGG TAACGTGCAA AGATCGTAAA GATCTGCCCG TAGGTATCAA CTGGCGCCGG
GTGTATGAGT ATGGTGGCGG TCTGTGGACA GAGAATGCCG ATGGCACTGT CAACCAGAAT
GTTTTCGCCT ACTATACCTC TATTGGCTGC AACCACTGTA GTGAGCCCGC CTGTGTCAAG
GCTTGCCCTG TGGGAGCCAT GCACAAACGC AAGCAAGATG GTTTGGTGCA TGTGGCGTCT
GACCTATGTA TTGGCTGCGA GAGTTGTGCC CGTGCCTGCC CATATGATGC GCCGCAAATT
GACAAGGCCC GTAAGGTGAT GACCAAGTGC GATGGCTGCT TTGAGCGTCT GGCCGAAGGT
AAGAATCCGA CCTGTGTCGA GTCATGTCCG ATGCGCGCCA TCGACTTTGG CACTATGGAT
GCGCTCAAAG AGAAATACCC GGATGCAGTT AAGCCCAACT TCGCTCCTTT ACCCAGCAGC
AGTATCACAT CGCCGAATCT GTTGATGAAA CCGAATCGTC ATGCTCGCGC CAGCGGCAGC
ATAGATGGTG TCGTGTTAAA CCATTCAGAG GTCTGA
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| Protein sequence | MSNNVQYGFY VDSSKCTGCK TCQVTCKDRK DLPVGINWRR VYEYGGGLWT ENADGTVNQN
VFAYYTSIGC NHCSEPACVK ACPVGAMHKR KQDGLVHVAS DLCIGCESCA RACPYDAPQI
DKARKVMTKC DGCFERLAEG KNPTCVESCP MRAIDFGTMD ALKEKYPDAV KPNFAPLPSS
SITSPNLLMK PNRHARASGS IDGVVLNHSE V
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