| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2915 |
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| Symbol | |
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| ID | 5609938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3526421 |
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| End bp | 3529528 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640933855 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001474650 |
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| Protein GI | 157376050 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.369342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGCCT ACATCACCCG TCATCCGACA TTAGCTAACC TGTTGATGCT CAGCCTGCTT
CTGCTCGGAT TATTGAATCT GGGCTCGATA AAGCGGGAGA CATTTCCTGA GTTTGCGCCT
CCCTACGTTA CCGCGACCGT CGTCTACCCC GGCGCATCGC CGATAGAGGT GGAAGAGAGC
CTATGCCTGC GTATGGAAGA TGCCGTCGAT GGACTGGGCA ATGTCGAAGA GGTGAAGTGT
GATGCGCAGG AAGGCGTAGC GTCCATGACC ATTAAGCTGG ACGCCAAAGC CGATATAGGG
CGTTCTCTGG TAGATGTGCA GACACAGATC AATGCGATTA AAAACTTTCC CTCTCAAATT
GAACCTCCTG TTGTTAAAGA GCTCGACTGG GCCGAGCCTG TTGTCGATAT CGCCATCTCG
GCAGATGCCA GCTGGCCACA TCTTAAGAGC TACGCCGAGG AGTTAAAGCG TCGCCTGAAG
ATCGATGCCG GAGTGAGTCT GGTATCGGTT GCCGGTTTCT CTGACCATCA ATTGCGGGTC
GAACTCAATC AAATTGATAT GCGCCGTCTG GGGCTGACTG CTGCTGACAT TGCCGATAAA
CTGGGTCGGC AAAATGTGAA GGTACCGGCC GGTAATATCG AGCTTAAGGA TAAAAACCTG
CTGCTCAGAT TCGATGAGCG CAAAGTCACG CCTGACGCGT TGAAGCAAAC CATCGTGGCC
TCAACCAGCG ATGGCAGCGT GGTCCGACTC GGAGATATTG CTACCGTGAC TGACAGGTTT
GAGCTCGATG AGGAGCACAT TCTGTTTAAC GGCCAGCATG CGGCCATAAT CAAGGTTCAA
AAGAATAAAG CCGACGATGC GTTAAGAATA AAAGAGAAGG TAAGCAGTTT TATCGAACTG
GAGCGTCTAC GTGCGCCCGA TGGTGTGAGT CTGACTCTGA CCAACGATCT CTCTTCACTG
CTTAAAGATC GTCTGGATAT GATGTTAACC AATGGCTGGC AAGGGATCAT CCTGGTCTTC
TTCAGCATGT GGTTATTTTT CTCTTTGCGT TACTCTTTTT GGGTATCGGC AGGTCTTCCC
GTCGCCTTTC TGGGCGGCAT CTATTTGATG AGTCTCTTTG GTGTCTCAAT CAACATCATG
AGTTTGGTTG GTCTGCTCAT GGCTATCGGT ATCATGATGG ATGATGCCAT CGTTATCGCC
GAGTCTATCG CCTCTCATGT GGATCGGGGC TTCGCCCCCC ATGAAGCTGT GGTTAAGGGA
GTGAAGAAAG TGGCGCCGGG GGTTGTCTCC TCATTTCTGA CCACCATCTT GATCTTCAGC
AGCCTGCTTG GGCTCGATGG TCAGATGGGG GCCGTGCTCT CGGCTATCCC GACAGTGCTG
ATTATGGTGC TCAGCATCAG TTTGATTGAG GCGTTCCTTA TCTTGCCCAA TCACCTTAAT
CACTCGCTGA GCCATGCGCC AAAGAAGGAG GCGAGGGGCG AGCTTAAATT TAAGCGAGAT
TTCTTAGCTA AATTTGAAGA GTTTCGTAAT ACTAAACTCG TCAATGCCGT TAGGTTTGTG
GTTCATTGGC GCTATGCGAG TGTCGGCATA ACCTTAGGTA TTCTGCTCTG CTCTGTGGCG
CTCGTCGCCG GTGGCGTGTT GAAGTTTGTT CCCTTTCCGG AGCTTGATGG TGATATTGCA
GAGGTCAGAA TCATCCTGCC GCCGGGGACG CCGTTGAGTA AGACTCAGCA GGTTGTCGAA
CGGGTGATCC TCAGCGCTAA AGAGACGGGT ACTCGCTATA CCGAGGAAGT GGAGGAAGGG
GTAGAGCTTA TTCAAGATAT TACCGCTCAG TATAATTTCA ATGCCGATGC CGGAGAGAAG
GGGCCTCATG TGGCAACGGT CAGGTTAGAT CTCTTGTCGG CCGAAACCCG TAATACCTTG
ATAGAAGATT TTATTCAGGA GTGGCGCGAT AATACCGGTG AGCTGGCATC CCCTCTGTCT
ATGGTGTTTA AGCAGCCAAC AATGGGGCCG GCGGGGCGTG ATATCGAGGT TCGTCTACAG
GGGGACAACC TGGATATGCT CAAGCAGGCG TCTGTGTCGC TTCAATTTTA TCTTGCCAGA
TTCGATGGTA TCAACGGTAT TCTCGATGAT ATGCGTCCGG GAAAAGAGGA GATAAAGGTA
AGTCTCAGGC CCGGAGCGGA AGCCTTTGGC ATAGATGGTC AACTGGTAGC CAACCAGCTG
CGCAGCGCGT TCTTTGGCCA GCGAGCCGAT GAGATCCAGA TAGGCCCGGA GAATATCGAA
ATTGAGGTCA GACTGAATAA GGTACAAGCC GGCGATCTGC ACGCGTTAGC TAACTTCCCC
ATTATCTTAG CCGATGGTAA TCAGCTGCCA CTGTCGGCGA TTGCCAAACT GGAGCACCAG
CGATCGTATG TCCGTATTCA GCGGATCGAT AGTCAGCGTT CGGTTACCGT GATGGCAGAT
GTGGACAACC GCAAGGGAAA TGCCACCGAA ACCTTAGCTA AGATAAAATC CGACTGGCTG
CCGCAAGTCA TACAGGATTA TCCCGGGGTT AGAGTCGACT TTGAAGGTTC GGCAAAAGAG
ACGGCTAAGA CGGGTGCCTC TCTCGGTAAA GGCTTCATCA TAGGTATGTT TGGACTCTTT
GCCATACTCA GTTTTCAATT CAGGAGTTAC CTGGAGCCCG TGGTTGTCAT GTTGGCGATA
CCGCTGGCAT TGATAGGCGT ACTTTGGGGA CATCTGCTAC TCGGCTATAA CCTCTCCATG
CCATCGATTA TGGGCTTCAT CTCCCTTGCC GGTATCGTCG TGAATGACTC AATCTTGTTG
GTGCAATATA TACGTCATCA TGTCGATGAG GGAGATAGTG TTCATGAAGC GGTGGTGAGT
GCCAGTCGGG AACGATTCAG AGCGGTATTT TTGACTTCGC TGACGACAGC TGCGGGTCTG
TTACCCCTGT TACTCGAATC AAGCTTGCAG GCACAAGTTG TGCAGCCCTT GGTTGTCTCA
ATCGTATTCG GGATCTTTGC CTCTACCTTG ATGGTGTTAT TTATCATCCC CTGTGCCTAC
GCGATTTTGG CTGACTTTGG GGTCGTGAGG AAACACCAGA AGATTTAG
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| Protein sequence | MIAYITRHPT LANLLMLSLL LLGLLNLGSI KRETFPEFAP PYVTATVVYP GASPIEVEES
LCLRMEDAVD GLGNVEEVKC DAQEGVASMT IKLDAKADIG RSLVDVQTQI NAIKNFPSQI
EPPVVKELDW AEPVVDIAIS ADASWPHLKS YAEELKRRLK IDAGVSLVSV AGFSDHQLRV
ELNQIDMRRL GLTAADIADK LGRQNVKVPA GNIELKDKNL LLRFDERKVT PDALKQTIVA
STSDGSVVRL GDIATVTDRF ELDEEHILFN GQHAAIIKVQ KNKADDALRI KEKVSSFIEL
ERLRAPDGVS LTLTNDLSSL LKDRLDMMLT NGWQGIILVF FSMWLFFSLR YSFWVSAGLP
VAFLGGIYLM SLFGVSINIM SLVGLLMAIG IMMDDAIVIA ESIASHVDRG FAPHEAVVKG
VKKVAPGVVS SFLTTILIFS SLLGLDGQMG AVLSAIPTVL IMVLSISLIE AFLILPNHLN
HSLSHAPKKE ARGELKFKRD FLAKFEEFRN TKLVNAVRFV VHWRYASVGI TLGILLCSVA
LVAGGVLKFV PFPELDGDIA EVRIILPPGT PLSKTQQVVE RVILSAKETG TRYTEEVEEG
VELIQDITAQ YNFNADAGEK GPHVATVRLD LLSAETRNTL IEDFIQEWRD NTGELASPLS
MVFKQPTMGP AGRDIEVRLQ GDNLDMLKQA SVSLQFYLAR FDGINGILDD MRPGKEEIKV
SLRPGAEAFG IDGQLVANQL RSAFFGQRAD EIQIGPENIE IEVRLNKVQA GDLHALANFP
IILADGNQLP LSAIAKLEHQ RSYVRIQRID SQRSVTVMAD VDNRKGNATE TLAKIKSDWL
PQVIQDYPGV RVDFEGSAKE TAKTGASLGK GFIIGMFGLF AILSFQFRSY LEPVVVMLAI
PLALIGVLWG HLLLGYNLSM PSIMGFISLA GIVVNDSILL VQYIRHHVDE GDSVHEAVVS
ASRERFRAVF LTSLTTAAGL LPLLLESSLQ AQVVQPLVVS IVFGIFASTL MVLFIIPCAY
AILADFGVVR KHQKI
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