| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2898 |
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| Symbol | |
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| ID | 5613814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3500864 |
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| End bp | 3502102 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933817 |
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| Product | serine/threonine transporter SstT |
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| Protein accession | YP_001474633 |
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| Protein GI | 157376033 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3633] Na+/serine symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0103964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCC AATCAATGAA TCAAAAACAA TCTTTATTAG CCAGACTGGC TAATGGCAGC
TTAGTGCTGC AAATCCTATT TGGGATAATC GCTGGTATTT CACTGGCGAC AATTTCGAAA
GATTCTGCAC ATAGCGTTGC CTTTTTGGGT GAGCTTTTTG TCGGAGCTTT AAAAGCAATT
GCGCCTATCT TAGTGTTTAT CTTAGTCGCG GCTTCAATTG CAAATCAGAA AAAAAACGCT
AAGACCAATA TGCGTCCAAT CGTTATCTTA TATCTATTTG GTACCTTTGC AGCGGCGATG
ACCGCTGTAC TTCTCAGCTT TACCTTCCCG ATCACTCTAG TGCTGGCAAC GGGCGCTGAA
GGGGCCACGC CACCGGAAGG GATTGGTGAA GTGATTCATA CTTTACTCTT CAAGTTAGTC
GATAACCCGG TTAATGCGGT TATGACCGGT AACTACATCG GAATTCTGGC TTGGGGCGTG
GGCCTTGGTT TGGCTCTTCA CCATGCAAGC GACTCAACCA AACAGGTATT TGCCGATGTG
AGTCATGGTA TTTCACAGAT GGTTCGTTTC ATCATTCGAT TAGCACCTAT CGGTATTTTC
GGGCTGGTTG CAGCTACATT TGCTAAAACA GGCTTCTCGG CTATCGCAGG TTATGGACAA
CTGTTAGCGG TTTTACTCGG CGCGATGGCA ATTATTGCGC TTGTCGTGAA TCCATTAATT
GTTTTCCTGA AAATAAGACG AAACCCATAT CCGTTAGTAT TGACGTGTCT ACGTGAGAGT
GGTGTTACCG CGTTTTTCAC TCGATCCAGT GCGGCAAATA TTCCGGTGAA TATGGCACTT
TGTGAAAAGC TTGAGCTGCA TGAAGATACA TATTCTGTGT CGATCCCACT AGGCGCAACG
ATCAACATGG GAGGGGCGGC TATCACGATT ACCGTTCTGA CTCTCGCGGC TGTCCATACT
ATGGGAATTC AAGTCGATAT TCTCACCGCT ATTTTACTCA GTGTCGTTGC AGCTGTATCG
GCCTGTGGTG CGTCAGGGGT TGCCGGGGGC TCACTCCTGC TTATTCCTCT TGCGTGTAGT
CTATTTGGGA TCTCAAACGA TGTTGCTATG CAAGTGGTTG CCGTCGGTTT CATTATCGGC
GTTATTCAGG ACTCTGCCGA AACGGGGCTA AATAGCTCAA CAGATGTACT CTTTACCGCC
GCAGCTTGTG AAGCGGCAGA AAGAAAAGAG ACGATATAA
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| Protein sequence | MTGQSMNQKQ SLLARLANGS LVLQILFGII AGISLATISK DSAHSVAFLG ELFVGALKAI
APILVFILVA ASIANQKKNA KTNMRPIVIL YLFGTFAAAM TAVLLSFTFP ITLVLATGAE
GATPPEGIGE VIHTLLFKLV DNPVNAVMTG NYIGILAWGV GLGLALHHAS DSTKQVFADV
SHGISQMVRF IIRLAPIGIF GLVAATFAKT GFSAIAGYGQ LLAVLLGAMA IIALVVNPLI
VFLKIRRNPY PLVLTCLRES GVTAFFTRSS AANIPVNMAL CEKLELHEDT YSVSIPLGAT
INMGGAAITI TVLTLAAVHT MGIQVDILTA ILLSVVAAVS ACGASGVAGG SLLLIPLACS
LFGISNDVAM QVVAVGFIIG VIQDSAETGL NSSTDVLFTA AACEAAERKE TI
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