| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2893 |
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| Symbol | queA |
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| ID | 5611245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3497033 |
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| End bp | 3498070 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933812 |
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| Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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| Protein accession | YP_001474628 |
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| Protein GI | 157376028 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
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| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.434885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000641463 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGCGTTA CTGATTTTTC ATTTGACCTC CCAGACGAGT TAATAGCCCG TTATCCAATG
GCAAACCGGA CATCTTCGAG ATTACTTTCA TTAGAGGGTA ATACCGGCAA GCTTGCCGAT
AATCAGTTCA CCGATATTTT GAACATGGTT AATCCTGGAG ATCTTATGGT GTTTAATAAC
ACTCGGGTGA TACCTGCGCG TCTCTTCGGC CAGAAAATAA CGGGTGGCAA GCTGGAAATC
CTTGTTGAGC GCATGCTTGA TGACAAGCGA ATTTTGGCTC ATGTAAGATG TTCTAAGTCC
CCTAAAGCTG ATTCGATCAT CTGTTTAGAT GGCGACTATG AGATGAAAAT GCTCGGTCGT
CACGATGCAT TATTCGAGCT TGAACTTCAA TCGGACAAGA CTATTCTTGA AGTACTCGAA
GAGGTGGGGC ATATGCCGCT GCCTCCTTAT ATCGACAGAC CCGATGAAGA TGCCGACAAA
GAGCGTTATC AGACAGTTTA CAATCAAAAT CCGGGTGCAG TAGCGGCGCC AACGGCGGGT
TTGCATTTCG ATGACGCTCT GTTGAAGGCG TTGAGCGATA AAGGTGTGGA TACCGCGTTT
GTGACTTTGC ATGTTGGAGC GGGAACATTT CAACCTGTAA AAGTTGATAA CATACTTGAA
CACAAGATGC ATTCTGAATG GGCCGAAGTT TCACAAGAGG TCGTCGCTAA AGTTGCGCAA
ACTAAAGCGA ATGGCAAACG TGTTATTGCC GTTGGTACAA CCTCGGTACG TTCTTTAGAG
AGTGCAGCGA AAGCGAGTGA AGGTGAGCTC AAAGAGTTTT GCAGCGATAC CGATATCTTT
ATCTACCCGG GATATGAGTT CAAAGTTGTC GACGCTATGG TGACCAATTT TCACCTTCCT
GAATCGACAT TAATTATGCT ACTCAGCGCA TTTGCCGGTT TCGATGAGGT AAAAAACGCC
TATCAACACG CGATTGCTCA AAAATACCGC TTCTTTAGCT ATGGTGATGC CATGTTTGTG
ACTAAAAAAG CGAACTAA
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| Protein sequence | MRVTDFSFDL PDELIARYPM ANRTSSRLLS LEGNTGKLAD NQFTDILNMV NPGDLMVFNN
TRVIPARLFG QKITGGKLEI LVERMLDDKR ILAHVRCSKS PKADSIICLD GDYEMKMLGR
HDALFELELQ SDKTILEVLE EVGHMPLPPY IDRPDEDADK ERYQTVYNQN PGAVAAPTAG
LHFDDALLKA LSDKGVDTAF VTLHVGAGTF QPVKVDNILE HKMHSEWAEV SQEVVAKVAQ
TKANGKRVIA VGTTSVRSLE SAAKASEGEL KEFCSDTDIF IYPGYEFKVV DAMVTNFHLP
ESTLIMLLSA FAGFDEVKNA YQHAIAQKYR FFSYGDAMFV TKKAN
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