| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2891 |
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| Symbol | yajC |
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| ID | 5611243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3495365 |
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| End bp | 3495697 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640933810 |
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| Product | preprotein translocase subunit YajC |
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| Protein accession | YP_001474626 |
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| Protein GI | 157376026 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1862] Preprotein translocase subunit YajC |
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| TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0845715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000439753 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGATTT CAAATGCTTA TGCTGCTGAT GCTCCTGTAA CTGGCGCCGG TGGCACCATG
GAACTGATTT TCATGCTAGT TATATTTGGC TTGATATTCT ATTTCATGAT TTTCCGTCCA
CAATCAAAGC GTGTTAAAGA GCACAAAAAC CTAATGGGCT CATTAGGTAA AGGTGATGAA
GTACTCACCA GTGGTGGTAT TTTAGGAAAA ATTGCAAAAA TCAGTGACGA AAATGACTAT
GTGTTACTGA CGATCAGTGA AACAACTGAA ATCACGATTA AAAAGGATTA CATTTCAGCT
GTATTGCCTA AAGGCTCTAT TAAGTCACTT TAA
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| Protein sequence | MLISNAYAAD APVTGAGGTM ELIFMLVIFG LIFYFMIFRP QSKRVKEHKN LMGSLGKGDE
VLTSGGILGK IAKISDENDY VLLTISETTE ITIKKDYISA VLPKGSIKSL
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