| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2886 |
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| Symbol | |
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| ID | 5613101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3490599 |
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| End bp | 3491510 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933805 |
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| Product | precorrin-2 oxidase / ferrochelatase |
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| Protein accession | YP_001474621 |
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| Protein GI | 157376021 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.360303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000078916 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGTATT TTCCATTGTT TGTCGATACC TCCCAGTTAA AAGTGTTACT GATAGGTGCC
GGTGAGGTCG CGAGCCGTAA GTTAGATCTC TTGGCCAGAA CCGAGGCCGA TATCTGTGTT
ATCGCCTCTG AGATCTCAGC CGAAGTTCAA GCCTATGCCG ACAAGGGGCG GATTTCACTC
TTCCAGCGTT CTGCTAAAGA TGATGATATT CAGGGTGTCG ATCTGGTCTA CCTCGCGACG
GCGGACCAAG TCTTGAATAC CACATTGGCT AATGTGGCAA AAAATCGAGG GATATGGGTC
AATGTCGTCG ATAGTCCAAA GTTATGTCGC TTTATCACCC CCTCTATTGT TGATCGCGGG
CGTTTACAAA TCGCGATCAG TACAGCCGGT GCAGCTCCGG TTTTTGCTCG TGAGCTAAGA
TCCCGATTGG AGTCCTGGCT ACCAGGTTCA TTGACTGAAC TGTTTGATTT TGTGGCAGAT
AGAAGACTAG AGGTACAGCA GAAGTTACCC GTATTTAAAC AGAGAAAGTT GTTCTGGGAG
CACTTTTTCA AAACCAATGG CGACAAGTTT GATGCTCAGA CCTCCATTCA TTACGACAAC
GCATTCCAAA ATATCTCAAC GGGTGGCGAA ATTCTGCTAT TAGATGATGA GACTCCGGTT
TCAATGCTAC CTATTGCGGC TATGCCTTTA CTGCAACGAT TAGATCATAT CTTTAGTATC
GAAACGCTAC CTTTCGAGCT GAATGAGTTA GTGAGGAGGG ATGCGAGTCG TGCTCCGTTG
CCACCTCTGA GTGAACTTAG CAGCTTGTTT GATCAGGGAA AGCGATGCCT GATAGTGACA
GACACTCAAA AACTGGCTCA GTTGAAGGCA CATTTCCCTA TGGCAAAACA TCTTAAAGCG
GGGTCGCTCT AA
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| Protein sequence | MQYFPLFVDT SQLKVLLIGA GEVASRKLDL LARTEADICV IASEISAEVQ AYADKGRISL
FQRSAKDDDI QGVDLVYLAT ADQVLNTTLA NVAKNRGIWV NVVDSPKLCR FITPSIVDRG
RLQIAISTAG AAPVFARELR SRLESWLPGS LTELFDFVAD RRLEVQQKLP VFKQRKLFWE
HFFKTNGDKF DAQTSIHYDN AFQNISTGGE ILLLDDETPV SMLPIAAMPL LQRLDHIFSI
ETLPFELNEL VRRDASRAPL PPLSELSSLF DQGKRCLIVT DTQKLAQLKA HFPMAKHLKA
GSL
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