| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2885 |
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| Symbol | |
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| ID | 5613360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3489956 |
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| End bp | 3490495 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933804 |
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| Product | YaeQ family protein |
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| Protein accession | YP_001474620 |
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| Protein GI | 157376020 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4681] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.120189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000102094 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACCTA AAGCAACAGT TTATAAAGTT CACCTTCAAA TCGCAGATAT GGATCGTGGT
TATTATCACG ATCACAACCT AACCCTTGCA CAGCACCCCT CAGAAACTGA TTCTCGTATG
ATGCTCCGTC TGCTGGCCTT TGCAATGAAT GCCAGTGACA CGCTTGAATT CAGTAAGGGC
CTTTGTGTCG AAGATGAGCC GGAGCTTTGG GAAAAATCAC TTATCGGTGA TATAGAGCTT
TGGATTGAGT TCGGTCAAAG TGATGAGAAG TGGCTTAGAA AGGCGAGTGG TCGTTCAAAG
CAGGTACAGC TCTTTGCCTA TGGCGGTCGC AGTGTACCTA TTTGGTGGAA ACAGAACGAA
CAAACATTTG AGCGTTATAA AAACCTGAAA GTGTGGAATA TTCCTGAGGA TTCCGTCAAA
GAGATGGGAG AATTAGTCAG TCGAAGTATG ACGCTTCAAT ATAATATCAG CGAAGGGCAG
ATCTGGGTCT CTAATGACAT CGGAAGTGTA CTCGTTGAGC CTGAGCTCTT AAAAGAATAA
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| Protein sequence | MAPKATVYKV HLQIADMDRG YYHDHNLTLA QHPSETDSRM MLRLLAFAMN ASDTLEFSKG
LCVEDEPELW EKSLIGDIEL WIEFGQSDEK WLRKASGRSK QVQLFAYGGR SVPIWWKQNE
QTFERYKNLK VWNIPEDSVK EMGELVSRSM TLQYNISEGQ IWVSNDIGSV LVEPELLKE
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