Gene Ssed_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2875 
Symbol 
ID5611329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3480844 
End bp3481647 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content44% 
IMG OID640933794 
Productinositol-phosphate phosphatase 
Protein accessionYP_001474610 
Protein GI157376010 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000220191 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATCCGA TGCAGACTAT TGCTGTGCGC GCTGCCCGCG CTGCCGGCCA AACGATTATA 
CGTGCCTTCG CAGAACTCGA CAAAGTTGAG GTTACAGCGA AAGGTATTAA TGACTACGTG
ACTAACGTAG ATAAAGAAGC TGAAGCTGCC ATTACTTATC AAATCCGTAA GTCTTACCCG
GATCACACTA TCATTGGTGA AGAAACTGGT GAGAATAAAG GCGAAAATAG CGAATACGTA
TGGATTGTAG ACCCTCTGGA TGGCACTAAC AATTTTGTTA AAGGCATCCC ACACTTTGCG
GTTTCTATCG CAGTTCAATA CAAAGGTAAG ACTGAAGTTG CCGTTGTGTA TGATCCAATT
CGCGACGAAC TATTTTCTGC CGTTCGCGGT AAAGGCGCAA AGTTCAATGA CTTCCGTATG
CGTGTTTCTA AGAAAAATGA TCTTAGCGAT GCGATTATCG CTACAGGCTT CCCTTTCAAA
GCCAAGCAGC ATACTGAAAC TTACATGAAA ATTTTTACTG AAATTTTCAC TCAATGTGCC
GATGTTCGTC GTGCAGGTTC TGCCGCACTC GATCTTGCTT ATGTTGGTGC GGGTCGCGTA
GATGGTTTCT TCGAAATTGG TCTTAAACCT TGGGATATTG CAGCAGGCGA GCTTATTGTT
CGTGAAGCTG GCGGTACTGT AACCGATTTC ACCGGTAACC ATGACTATAT GACATCAGGT
AATATTATTG CGGGTTCACC AAAAGCCACG TCAATAATCG TTAAAACTGC TCGCCCATTA
CTAAGCGAAG CACTTAAACG TTAA
 
Protein sequence
MHPMQTIAVR AARAAGQTII RAFAELDKVE VTAKGINDYV TNVDKEAEAA ITYQIRKSYP 
DHTIIGEETG ENKGENSEYV WIVDPLDGTN NFVKGIPHFA VSIAVQYKGK TEVAVVYDPI
RDELFSAVRG KGAKFNDFRM RVSKKNDLSD AIIATGFPFK AKQHTETYMK IFTEIFTQCA
DVRRAGSAAL DLAYVGAGRV DGFFEIGLKP WDIAAGELIV REAGGTVTDF TGNHDYMTSG
NIIAGSPKAT SIIVKTARPL LSEALKR