Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2875 |
Symbol | |
ID | 5611329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3480844 |
End bp | 3481647 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640933794 |
Product | inositol-phosphate phosphatase |
Protein accession | YP_001474610 |
Protein GI | 157376010 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000220191 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCATCCGA TGCAGACTAT TGCTGTGCGC GCTGCCCGCG CTGCCGGCCA AACGATTATA CGTGCCTTCG CAGAACTCGA CAAAGTTGAG GTTACAGCGA AAGGTATTAA TGACTACGTG ACTAACGTAG ATAAAGAAGC TGAAGCTGCC ATTACTTATC AAATCCGTAA GTCTTACCCG GATCACACTA TCATTGGTGA AGAAACTGGT GAGAATAAAG GCGAAAATAG CGAATACGTA TGGATTGTAG ACCCTCTGGA TGGCACTAAC AATTTTGTTA AAGGCATCCC ACACTTTGCG GTTTCTATCG CAGTTCAATA CAAAGGTAAG ACTGAAGTTG CCGTTGTGTA TGATCCAATT CGCGACGAAC TATTTTCTGC CGTTCGCGGT AAAGGCGCAA AGTTCAATGA CTTCCGTATG CGTGTTTCTA AGAAAAATGA TCTTAGCGAT GCGATTATCG CTACAGGCTT CCCTTTCAAA GCCAAGCAGC ATACTGAAAC TTACATGAAA ATTTTTACTG AAATTTTCAC TCAATGTGCC GATGTTCGTC GTGCAGGTTC TGCCGCACTC GATCTTGCTT ATGTTGGTGC GGGTCGCGTA GATGGTTTCT TCGAAATTGG TCTTAAACCT TGGGATATTG CAGCAGGCGA GCTTATTGTT CGTGAAGCTG GCGGTACTGT AACCGATTTC ACCGGTAACC ATGACTATAT GACATCAGGT AATATTATTG CGGGTTCACC AAAAGCCACG TCAATAATCG TTAAAACTGC TCGCCCATTA CTAAGCGAAG CACTTAAACG TTAA
|
Protein sequence | MHPMQTIAVR AARAAGQTII RAFAELDKVE VTAKGINDYV TNVDKEAEAA ITYQIRKSYP DHTIIGEETG ENKGENSEYV WIVDPLDGTN NFVKGIPHFA VSIAVQYKGK TEVAVVYDPI RDELFSAVRG KGAKFNDFRM RVSKKNDLSD AIIATGFPFK AKQHTETYMK IFTEIFTQCA DVRRAGSAAL DLAYVGAGRV DGFFEIGLKP WDIAAGELIV REAGGTVTDF TGNHDYMTSG NIIAGSPKAT SIIVKTARPL LSEALKR
|
| |