Gene Ssed_2868 details

Gene Information

• Locus tag: Ssed_2868
• Symbol: hscB
• ID: 5610582
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sediminis HAW-EB3
• Kingdom: Bacteria
• Replicon accession: NC_009831
• Strand: -
• Start bp: 3475616
• End bp: 3476146
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640933787
• Product: co-chaperone HscB
• Protein accession: YP_001474603
• Protein GI: 157376003
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.972564
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 2
• Fosmid unclonability p-value: 0.0000000210214
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAACTATT TTGAGCTGTT TAGTTTTACA CCTTCCTACG AAATAGACAC CGCCTTACTT 
GCAGAACGCT ATCGCGAACT GCAAAGGGCG GTTCACCCCG ATAAGTTTGC TAACTCCAGT 
GAACAAGATA AACGTATTGC CGTTCAGCGT ACCGCCCAGG TAAACGACGG CTTTTCGACG 
TTGAAAAATC CAATAACAAG AGCCGAACAT ATTCTTGCAT TGAATGGATT TGATCTTCTA 
CACGAGTCGA CGACTGTCAA AGATACTCAT TTTTTAATGC AGCAGATGGA GTGGCGTGAA 
TCCCTCGAAG ATATCGCTCA CAGTAGTGAT CCCGATGAGA TGATTGCCGA CTTACACGAG 
TCATTTTCGG TTTATGCTAA GGAGATTGAG CAAGATTTAG CTCAATTGCT TCTAAGTAAC 
TCTGAGGAAG AGCTGTCAAA AGCTGCAGAT CTTATTCGAA AATTGAAATT TATGGCTAAG 
TTACAGATTG AACTTGAGCG TGCGGAAGAC GTTCTGTTTG ATCAGGCTTA G 

 

Protein sequence

MNYFELFSFT PSYEIDTALL AERYRELQRA VHPDKFANSS EQDKRIAVQR TAQVNDGFST 
LKNPITRAEH ILALNGFDLL HESTTVKDTH FLMQQMEWRE SLEDIAHSSD PDEMIADLHE 
SFSVYAKEIE QDLAQLLLSN SEEELSKAAD LIRKLKFMAK LQIELERAED VLFDQA