Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2866 |
Symbol | |
ID | 5613344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3473317 |
End bp | 3473655 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640933785 |
Product | ferredoxin, 2Fe-2S |
Protein accession | YP_001474601 |
Protein GI | 157376001 |
COG category | [C] Energy production and conversion |
COG ID | [COG0633] Ferredoxin |
TIGRFAM ID | [TIGR02007] ferredoxin, 2Fe-2S type, ISC system |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000015343 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGCAAA TTGTATTTTT ACCCCATGAA GAACTATGTC CCGATGGGGC CGTTATTGAA GCCAATGTAG GTGAAACGGT TTTAGATGTT GCTCTGAAAA ATGGCATTCA TATTGAGCAT GCTTGTGAGA AAGTTTGTGC ATGTACTACC TGTCATGTTG TGGTTCGTGA AGGGTTTGAT GAGCTTGAAG AGAGCGATGA GCTCGAAGAT GACATGCTGG ATAAGGCATG GGGCTTGGAA CCTGAAAGTC GTCTTTCGTG CCAGACCAAA GTACCTGACT GTGACTTGGT CGTGGATATT CCCAAGTACA CCATCAATAT GGTGAGTGAA GGCAACTAG
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Protein sequence | MPQIVFLPHE ELCPDGAVIE ANVGETVLDV ALKNGIHIEH ACEKVCACTT CHVVVREGFD ELEESDELED DMLDKAWGLE PESRLSCQTK VPDCDLVVDI PKYTINMVSE GN
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