Gene Ssed_2866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2866 
Symbol 
ID5613344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3473317 
End bp3473655 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content45% 
IMG OID640933785 
Productferredoxin, 2Fe-2S 
Protein accessionYP_001474601 
Protein GI157376001 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID[TIGR02007] ferredoxin, 2Fe-2S type, ISC system 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000015343 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCAAA TTGTATTTTT ACCCCATGAA GAACTATGTC CCGATGGGGC CGTTATTGAA 
GCCAATGTAG GTGAAACGGT TTTAGATGTT GCTCTGAAAA ATGGCATTCA TATTGAGCAT
GCTTGTGAGA AAGTTTGTGC ATGTACTACC TGTCATGTTG TGGTTCGTGA AGGGTTTGAT
GAGCTTGAAG AGAGCGATGA GCTCGAAGAT GACATGCTGG ATAAGGCATG GGGCTTGGAA
CCTGAAAGTC GTCTTTCGTG CCAGACCAAA GTACCTGACT GTGACTTGGT CGTGGATATT
CCCAAGTACA CCATCAATAT GGTGAGTGAA GGCAACTAG
 
Protein sequence
MPQIVFLPHE ELCPDGAVIE ANVGETVLDV ALKNGIHIEH ACEKVCACTT CHVVVREGFD 
ELEESDELED DMLDKAWGLE PESRLSCQTK VPDCDLVVDI PKYTINMVSE GN