| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2853 |
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| Symbol | |
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| ID | 5612928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3453756 |
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| End bp | 3454310 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933772 |
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| Product | adenine phosphoribosyltransferase |
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| Protein accession | YP_001474588 |
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| Protein GI | 157375988 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins |
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| TIGRFAM ID | [TIGR01090] adenine phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.22702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000299091 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATATCGA TGAATAACGA CACCTTAGCA GTGATAAAAC AGAGCATAAA AACCATTCCA
GATTATCCAA AACCTGGGAT CCTTTTTCGA GATGTGACAA GTTTGCTGGA AGATCATACC
GCTTATAAGG CGACAATGGA TATCTTGGTT GAGAAGTATA AGGACCAAGG TTTCACTAAG
GTTGTCGGTA CTGAAGCGCG TGGTTTTCTA TTTGGTGCGC CTTTAGCCCT CGAACTCGGT
CTGGGTTTTG TTCCTGTTCG TAAACCAGGT AAATTGCCTC GCGAAACGAT TTCAGAAAGC
TATGAGCTTG AATATGGGCA CGATGTATTA GAGATCCATG TCGATGCTAT CAATGAAAAT
GATAAAGTGC TTGTTATCGA TGATCTGCTT GCGACAGGTG GTACAATCGA AGCCACTGTT
AAATTGATCA GAAACTTAGG TGGTAAGGTA AACCACGCCG CATTCGTTAT CTCTTTGCCC
GATCTCGGCG GTGAGAAACG CCTTCAAGCG ATGGATCTTG AGCTCGTTAA ACTGTGTGAG
TTTGACGGCG AATAA
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| Protein sequence | MISMNNDTLA VIKQSIKTIP DYPKPGILFR DVTSLLEDHT AYKATMDILV EKYKDQGFTK
VVGTEARGFL FGAPLALELG LGFVPVRKPG KLPRETISES YELEYGHDVL EIHVDAINEN
DKVLVIDDLL ATGGTIEATV KLIRNLGGKV NHAAFVISLP DLGGEKRLQA MDLELVKLCE
FDGE
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