Gene Ssed_2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2847 
Symboladk 
ID5612448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand- 
Start bp3445828 
End bp3446472 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content49% 
IMG OID640933766 
Productadenylate kinase 
Protein accessionYP_001474582 
Protein GI157375982 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0563] Adenylate kinase and related kinases 
TIGRFAM ID[TIGR01351] adenylate kinases 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000688641 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones1 
Fosmid unclonability p-value0.00000000215669 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCATCA TGTTATTAGG TGCCCCAGGT GCCGGTAAAG GTACCCAGGC CCAGTTCATC 
ATGGAAAAGT ACGGTATCCC GCAAATTTCA ACAGGTGATA TGTTACGTGC AGCGGTTAAA 
GCTGGCACAC CTCTTGGTTT AGAAGCTAAG AAAGTGATGG ATGCAGGCCA GTTGGTCTCA 
GATGAGCTGA TCATTGGGTT AGTAAAAGAG CGTGTAGCTC AAGATGATTG TGCGAAAGGT 
TTCCTGCTTG ACGGTTTTCC GCGTACGATC CCACAGGCCG ATGCGATGGC TTCGAGTGGG 
ATCAGTATCG ACCATGTCGT TGAGATCGAC GTACCCGATG AAGAGATCGT TAAACGCATG 
GGTGGCCGCC GTGTTCACCC AGGTTCTGGT CGTGTTTATC ATATCGTTTT CAATCAACCA 
AAAGTTGAAG GAAAGGATGA TGTGACAGGC GAAGAGTTGG CTATTCGTCC TGATGACGAA 
GAGAGCACAG TTCGTAAGCG TCTGGCTATT TACCACGAGC AGACTAAGCC ACTCGTTGAA 
TATTATGGCA AGGTTGCGGC AGCGGGTCAC TCTACATACA GCAAGTTTGA CGGCACTCAG 
AGTGTTGCTG CTGTGAGTGA GCAGATTGTT ACAGCGTTAA GCTAA
 
Protein sequence
MRIMLLGAPG AGKGTQAQFI MEKYGIPQIS TGDMLRAAVK AGTPLGLEAK KVMDAGQLVS 
DELIIGLVKE RVAQDDCAKG FLLDGFPRTI PQADAMASSG ISIDHVVEID VPDEEIVKRM 
GGRRVHPGSG RVYHIVFNQP KVEGKDDVTG EELAIRPDDE ESTVRKRLAI YHEQTKPLVE 
YYGKVAAAGH STYSKFDGTQ SVAAVSEQIV TALS