| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2846 |
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| Symbol | hemH |
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| ID | 5612447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3444642 |
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| End bp | 3445649 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933765 |
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| Product | ferrochelatase |
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| Protein accession | YP_001474581 |
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| Protein GI | 157375981 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0276] Protoheme ferro-lyase (ferrochelatase) |
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| TIGRFAM ID | [TIGR00109] ferrochelatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000266321 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000209416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAATTCAA TGATGAGCGA GACACCCCCG GCATTTGGTG TACTTTTGGT GAATTTGGGG
ACCCCCGATT CTCCAAGTGC GAGTGACGTT AAGCGTTTTC TTAAGCAGTT TCTAAGCGAT
CCCCGTGTTG TTGATCTGAA TCCATTGATT TGGAAACCGA TCTTAAATGG CATCATTTTA
AATACTCGTC CCGCTAAAGT CGCAAAATTA TATCAAGCTA TCTGGTCCGA TGAAGGCTCT
CCGTTAATGG TGGTCAGCCA ACGACAACGA GAGAAGGTCG CCAGCTTATT GCAAGAGCAG
CTTGGGCAAG CGATCCCTGT GGAGCTGGGG ATGAGTTATG GTAATCCATC TTTGGCTTCC
GGTTTAGAAA AACTGAAGCA ACAAGGTGTC AAACGGATTG TCGTACTGCC ACTTTATCCG
CAATATTCAT GTTCGACCGT CGCACCGGTT TTTGACGCCA TTGCGGCCGA GTTCAAAGGT
TGGAGGGATA TTCCCGAGAC CCGGTTTAAT AAAGAGTACT ATCAAGATCC CACTTATATT
GAGGCGTTGG CTTCCTCTGT GAAGTCTCAC TGGAATGAAC ATGGTCAGGC CGATGTTCTA
TTGATGTCCT TTCATGGCGT GCCGGTAAGA TATGTTAATG AAGGGGACCC TTATCAAGCG
CAGTGCCAGG CTACGGCGCT CTTGCTTGCT CAGGCCTTAG GATTGAAGGA TGAACAGTGG
AAGCTCTGTT TTCAGTCACA GTTTGGAAAG GAGGAGTGGT TAACGCCCTA TACTGATAAG
TTATTGGAGT CACTCCCTGA GAAAGGCGTG AAATCAGTCG ATATTATGTG TCCTGCATTC
GCAGCCGATT GTTTAGAAAC CCTCGAAGAG ATCTCCATCG GTGGTAAAGA GAGCTTTATC
GAATCGGGTG GTGAAAGCTA TCGTTTTATT CCCTGCCTTA ATGACAATGA GCCTCACATT
GAATTGTTGG CTAAGCTGGT CACTGAGCAA GCAGCTCAAT GGGTTTGA
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| Protein sequence | MNSMMSETPP AFGVLLVNLG TPDSPSASDV KRFLKQFLSD PRVVDLNPLI WKPILNGIIL
NTRPAKVAKL YQAIWSDEGS PLMVVSQRQR EKVASLLQEQ LGQAIPVELG MSYGNPSLAS
GLEKLKQQGV KRIVVLPLYP QYSCSTVAPV FDAIAAEFKG WRDIPETRFN KEYYQDPTYI
EALASSVKSH WNEHGQADVL LMSFHGVPVR YVNEGDPYQA QCQATALLLA QALGLKDEQW
KLCFQSQFGK EEWLTPYTDK LLESLPEKGV KSVDIMCPAF AADCLETLEE ISIGGKESFI
ESGGESYRFI PCLNDNEPHI ELLAKLVTEQ AAQWV
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