| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2842 |
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| Symbol | |
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| ID | 5610454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3437553 |
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| End bp | 3438890 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640933761 |
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| Product | succinylarginine dihydrolase |
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| Protein accession | YP_001474577 |
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| Protein GI | 157375977 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3724] Succinylarginine dihydrolase |
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| TIGRFAM ID | [TIGR03241] succinylarginine dihydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.355282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000291277 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCACT TTGAAGCGAA TTTTGATGGA CTGGTTGGAC CGACTCACAA CTACGCAGGG
CTCTCTTTTG GCAATGTCGC CTCCCTCAAT AATGCGGCGG CCACCTCAAA CCCAAGAGCG
GCGGCTAAAC AAGGCTTGAA AAAAGCCAAA GCACTTGCAG ATATGGGTAT GGTCCAAGGC
ATGTTAGCCC CTCAGGAGCG CCCAGATCTT CACACACTGC GTAGAATTGG TTTTTCAGGC
ACTGATGCAG AAATTTTAAA TAAAGCCGCT AAAGAGGCTC CTGCGTTGCT AAGAGCATGT
TGTAGCGCAT CAAGCATGTG GACAGCCAAC GCGGCCACCG TATCGCCAAG CGCCGATACC
CATGATGGCA AGCTACACTT CACGCCTGCA AACCTGGTTG ATAAGTTGCA CCGTAGCATA
GAGCCAGAGA CCACCGGCAA TATCCTCGCC GCGACATTCA ATAATTCGCG TCACTTTGCC
CATCACCAAC ATCTGCCGGA ACACAGCAGC TTCGGTGACG AAGGGGCTGC CAACCACACC
CGCCTTTGCA AAGATTATGG CAATGCCGGT GTTGAACTAT TTGTCTATGG CCAGGAAGCG
ACGAACCCAG CCGCCCCTAA GCCATCAAAA TTTCCTGCCA GACAAACCCT GGAAGCCTCA
CAGGCCATAG CACGCCTTCA TCAGCTCGAT GATGAGAACA CGGTGTTTAT CTCTCAAAAC
CCGGATGTCA TCGATCAGGG CGTTTTCCAC AATGACGTCA TTGCCGTCGG TAACCAGAAT
GTCCTCTTCT ACCACGAGCA GGCCTTTCTC GATACCAAAC GCAAACTCGA TGAGATAAAA
CGTAAATTCG GCGATAGCGA ACTTCACTTT ATCGAAGTCC CGACCAGTAG AGTTGCCATA
CAAGATGCGG TGAAGAGTTA TCTGTTCAAT ACTCAGATCA TCACACTGCC ATCGGGTGAG
ATGGCCATCA TAGCGCCAAC TAACTGCCAG GAGAATGAAG CCGTTCACGC CTACCTTAAC
GAGGTGGTCA CCTTAGGGTC GCCGATTAAG CAGGTTAACT ATTTTGATGT GAAGCAGAGC
ATGCAAAATG GTGGCGGCCC GGCATGTCTG AGATTGCGTG TGGCGATGAA CGACATGGAG
CTGGCCGCGG TTAATCAGCA CACCTTGATG AATGATGCCC TATTTACACG TCTTAACGCC
TGGGTAGATA AGCATTACCG TGACCGTCTC AGCGTCGATG ACTTAGCGGA CCCTCAGGTA
CTCATCGAGT CACGCACCGC GCTGGATGAG CTGACGCAGA TAATGAAACT GGGTAGCGTA
TACCAGTTCC AGAAGTAA
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| Protein sequence | MKHFEANFDG LVGPTHNYAG LSFGNVASLN NAAATSNPRA AAKQGLKKAK ALADMGMVQG
MLAPQERPDL HTLRRIGFSG TDAEILNKAA KEAPALLRAC CSASSMWTAN AATVSPSADT
HDGKLHFTPA NLVDKLHRSI EPETTGNILA ATFNNSRHFA HHQHLPEHSS FGDEGAANHT
RLCKDYGNAG VELFVYGQEA TNPAAPKPSK FPARQTLEAS QAIARLHQLD DENTVFISQN
PDVIDQGVFH NDVIAVGNQN VLFYHEQAFL DTKRKLDEIK RKFGDSELHF IEVPTSRVAI
QDAVKSYLFN TQIITLPSGE MAIIAPTNCQ ENEAVHAYLN EVVTLGSPIK QVNYFDVKQS
MQNGGGPACL RLRVAMNDME LAAVNQHTLM NDALFTRLNA WVDKHYRDRL SVDDLADPQV
LIESRTALDE LTQIMKLGSV YQFQK
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