Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2806 |
Symbol | |
ID | 5613641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3389301 |
End bp | 3389792 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640933725 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001474541 |
Protein GI | 157375941 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTGA CAATCAGACA CACAGAGCCT AATGATTTTG TCGGTATACA GGCCCTTTAT GCTCAACCAG GAGCCTATTC GGGCACGCTG CAACTCCCCT ATCCTTCTCA ACAATTGTGG GAGCAGCGAC TCGCTGAGCC AAATAAAGAC AGTTACAGCC TGGTCGCTGA GGCTAACGGG ATCATAGTCG GCCAGATTGG CATGCAGCTC ATGAGCTCTC CCCGCCGCAG ACATGTGGGT AATATCGGAA TGGCTGTCTG CAGCAACCAA CAAAACCAAG GCATTGGCGC TAAACTGTTG GCGGCTATGG TCGATCTTGC TAACAACTGG CTTTCAGTGA CGCGAATTGA ACTCGAGGTA TACACGGATA ATGAGGCCGC TATCGCCCTG TATGAGAAGT CCGGCTTTGT GAAGGAGGGG ACGGCAAAAA ACTATGCATT TCGCGATGGA CAGTATGTCG ACGCCTATCT GATGGCAAGA GTCTCCAGCT AA
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Protein sequence | MEVTIRHTEP NDFVGIQALY AQPGAYSGTL QLPYPSQQLW EQRLAEPNKD SYSLVAEANG IIVGQIGMQL MSSPRRRHVG NIGMAVCSNQ QNQGIGAKLL AAMVDLANNW LSVTRIELEV YTDNEAAIAL YEKSGFVKEG TAKNYAFRDG QYVDAYLMAR VSS
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