| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2777 |
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| Symbol | |
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| ID | 5613090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3348183 |
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| End bp | 3349550 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640933696 |
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| Product | adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| Protein accession | YP_001474512 |
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| Protein GI | 157375912 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00163643 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.106006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA CTAATTTACC AAAAAATCAT GCTCAAACCT CATCTATCGA CTTTGAATTT
GATAAACAAC ATATCTGGCA CCCCTATACC TCGATGACCC AGGCACTGCC GGCTTTCGGC
GTCGTCTCGG CTCAGGGCTG CGAGCTCACA CTCGACGACG GCAAGGTCTT AGTCGATGGC
ACCAGCTCAT GGTGGGCCTG CGTACATGGT TACAGTCATC CGGCCATTCT CGATACCATG
CAGCAGCAAC TCGGCACCTT AAGTCATGTG ATGTTCGGTG GGATCACCCA CCAGCCAGCC
ATCGAGTTAT CGAAGAAGCT CGTCGGGATA ACTAGCCCCA AGCTGACAAA AGTCTTCCTG
GCCGACTCGG GCTCCATCGC CGTTGAGGTG GCACTTAAGA TGGCACTGCA ATATTGGCAA
GGCCGAAGCC AGAGTCAGAA GCAGCGCATC CTCACCGTCA AGTGTGGCTA CCATGGTGAT
ACCTTCGCCG CCATGAGTGT GTGCGACCCC GAAGGCGGCA TGCACACTAT GTTTGGCGAC
AGCGTCACCC AACATGAATT TGTCTCGGCG CCCCAAAGCA GATTTGACGA GCCTCTGTTA
AGCCACGATC TCGATGAGAT GCGCGCTAAG CTCATTTCAC AGCACAGTGA AATCGCCGCC
GTGATCATAG AACCAATTCT TCAGGGCGCC GGTGGCATGC GCTTCTACAG TCCTGAGTAC
CTTATCGGGC TGCGTAAACT CTGTGATGAA TTCAATGTGT TACTTATTCT CGATGAGATA
GCGACCGGCT TTGGCCGCAC CGGAAAACTG TTTGCCTACG AGCATGCCGC TATTGATGGA
CAGTGCGTAG AAGCGGATAT TCTCTGTCTG GGTAAGGCCC TGACGGGGGG CTATATCTCA
CTCGCCGTGA CTATGTGCAG TGATGAGGTG GCGCAAGGGA TAAGCGATTC ACCGGCCGGC
GTATTCATGC ATGGACCTAC GTTTATGGGC AATCCTCTGG CCTGCGCCGC CGCCTGTGCG
AGTCTGGATC TTCTCGCCCA AGATGATTGG CAAGATCAAA TCAAACAGAT CGAACGCCAG
ATGAAGATAG AGCTCAAAGG CGCCATCGAT TACCCGGAGG TCAAAGATGT GCGGGTGTTG
GGCGCCATCG GTGTTATCGA GATGAACTCG ACGGTGAACA CCGCCGAGCT TCAGCAGGAG
TTTGTCGACC TGGGCGTATG GATCAGGCCT TTTTCCAACC TCATCTATAT CATGCCCCCT
TTCGTTATCA CCTCGGCAGA GCTCACTAAG CTGACATCGG CGATGAAACA TGTTGCCAAA
GGGATAACGG CGAGCAGCAA AGAGGCCGGC TTCATCAGCC ATGGCTGA
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| Protein sequence | MNKTNLPKNH AQTSSIDFEF DKQHIWHPYT SMTQALPAFG VVSAQGCELT LDDGKVLVDG
TSSWWACVHG YSHPAILDTM QQQLGTLSHV MFGGITHQPA IELSKKLVGI TSPKLTKVFL
ADSGSIAVEV ALKMALQYWQ GRSQSQKQRI LTVKCGYHGD TFAAMSVCDP EGGMHTMFGD
SVTQHEFVSA PQSRFDEPLL SHDLDEMRAK LISQHSEIAA VIIEPILQGA GGMRFYSPEY
LIGLRKLCDE FNVLLILDEI ATGFGRTGKL FAYEHAAIDG QCVEADILCL GKALTGGYIS
LAVTMCSDEV AQGISDSPAG VFMHGPTFMG NPLACAAACA SLDLLAQDDW QDQIKQIERQ
MKIELKGAID YPEVKDVRVL GAIGVIEMNS TVNTAELQQE FVDLGVWIRP FSNLIYIMPP
FVITSAELTK LTSAMKHVAK GITASSKEAG FISHG
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