| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2776 |
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| Symbol | |
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| ID | 5612413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3347008 |
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| End bp | 3348072 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640933695 |
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| Product | biotin synthase |
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| Protein accession | YP_001474511 |
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| Protein GI | 157375911 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0502] Biotin synthase and related enzymes |
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| TIGRFAM ID | [TIGR00433] biotin synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000782916 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0347779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATA TACAGCTGCG TCACGATTGG AAACATGATG AAATCGAAGC ACTCTTTGCT
TTACCTATGA ATGATCTCCT GTTTAAGGCG CATTCATTGC ATCGTCAGGT TTTTGATCCT
AACGAAGTGC AGATCAGCCG ACTGCTATCG ATTAAAACCG GTGCTTGCCC GGAAGATTGT
AAATATTGTC CTCAAAGTGC CCGATACGAT ACAGGCCTCG AGAAAGAGCG CCTGATCGAG
ATTGAAAAGG TGCTCACCGA AGCCCGCAGT GCCAAAGCTG CCGGTGCCTC GCGTTTCTGT
ATGGGCGCAG CATGGCGTAA CCCCCACGCT CGCGATATGC CCTATCTGAA AGATATGGTA
AGTGAAGTGA AGGCGATGGG CATGGAAACC TGTATGACAC TGGGTATGTT GTCCGGCACT
CAAGCTGAAG AGTTGGCCGA GGCCGGACTC GATTACTACA ACCATAATTT AGATACCTCC
CCCGAGTATT ACGGTGAGAT CATCACGACC CGCACCTATC AGGACAGGTT GGATACCCTT
TCCAATGTTC GCTCCGCAGG CATGAAGGTC TGCTCCGGCG GGATCGTCGG CATGGGTGAG
CAGGCGAGTG ACCGTGCGGG TCTGTTACAG CAACTGGCTA ATATGGAGCA GCATCCGGAT
TCTGTTCCGA TCAATATGTT AGTTAAAGTG GCGGGGACGC CATTTGAGAA TTTAGACGAT
CTCGACCCTC TCGAGTTTGT TCGCACCATC GCCGTGGCTC GAATTATTAT GCCTCACTCC
CGGGTACGTC TGTCGGCGGG TCGCGAGAAG ATGACCGACG AGATGCAAGC CATGTGTTTC
TTTGCCGGTG CCAACTCAAT TTTCTATGGC TGTAAGCTAC TCACGACCAA TAACCCGGAA
GAGAATGAAG ATATGACCCT GTTTAAGCGT CTGGGTCTGC ATCCTGAGCA GGGCAAGTAT
GCCACCGTCG AAGATGATAA AGAGGTGATG GCTAAGGCGA GTGCTAAGGC CAATGCCATT
AAAGATAAGC AAAGCGGTGC ATTTTATGAT GCAGGCGCAC TCTAG
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| Protein sequence | MSDIQLRHDW KHDEIEALFA LPMNDLLFKA HSLHRQVFDP NEVQISRLLS IKTGACPEDC
KYCPQSARYD TGLEKERLIE IEKVLTEARS AKAAGASRFC MGAAWRNPHA RDMPYLKDMV
SEVKAMGMET CMTLGMLSGT QAEELAEAGL DYYNHNLDTS PEYYGEIITT RTYQDRLDTL
SNVRSAGMKV CSGGIVGMGE QASDRAGLLQ QLANMEQHPD SVPINMLVKV AGTPFENLDD
LDPLEFVRTI AVARIIMPHS RVRLSAGREK MTDEMQAMCF FAGANSIFYG CKLLTTNNPE
ENEDMTLFKR LGLHPEQGKY ATVEDDKEVM AKASAKANAI KDKQSGAFYD AGAL
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