| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2775 |
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| Symbol | |
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| ID | 5612412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3345789 |
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| End bp | 3346979 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640933694 |
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| Product | 8-amino-7-oxononanoate synthase |
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| Protein accession | YP_001474510 |
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| Protein GI | 157375910 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00358245 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0206135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATTGTGT CTGATGTTAG CGCCGGGTCT AAGGCTAAAA AACACTCTTT ATCCGATAAG
ATTAGGAGCA AACAGGCTCA GCTTAACGAT GCCGGCCTGT TGAGGCGCAG ACAAGCCTTA
ACGCCAATTG AGGGAGAGAC GGTAGACTTT TCCTTGAATG GCAGGCACTA CCTTAATTTC
AGTAGCAATG ATTATCTTGG ACTCTCTCAG GCGTCAGGGC TGCTCGATTC ACTCAATACC
GGTGCCAAGA GATATGGCGT CGGCAGTGGC TCCTCTCCTT TAGTCACGGG CTACAGTGAG
GCGCACGTAC GCCTGGAGCA AACGCTCTGC CAAATTACCG GACACGAAGC GGGGCTGCTA
TTCTGCTCAG GTTTCAGTGC AAATTCTGCA TTGATGAAAA CCTTGTTCGG TAGCGGTGAT
ACCGTGATTG CCGATAAGTT GGTTCATGCC TCGATTATCG ACGGGTTAAC CGACAGCGAG
GCGACATTTA AACGTTTTTT GCATAACGAT ATTCAAAGTG CCGATCGATT AATCGCTAAA
TACTCCCCCC AAGCCGTTAT CACCGAGAGC ATATTCAGTA TGGATGGTGA TATGGCGCCC
CTCGAGGCGC TATCAACATC TTGCAAACGA AATAACAGCT GGTTGATTGT CGATGACGCC
CATGGTTTCG GCATTCAGGC CGCCCTGGGT AATTATGTTC CCGCCAGCGC CGAGCTTGCC
GATGTACAGG TAGTCACCTT CGGCAAGGCC CTGGGTTGTC AGGGCGCTGC GATTCTGGGC
AGTCAGGCAT TAATCGACTT CTTAGTGTCT AACGCCAGAG ATTATATCTA CTCGACGGCG
CTTTCTCCGG CGAATGCCTG TGTCGCGTTG GCGGCGGTGG AGCTGACACA AGAATCCGAT
GAGCGGGCAT TAACCTTGGC CGATAACATC CATTACTTTA AACGGGCTTG CTCGTTAGCT
AACATAGGCC TGACAGAATC GATAACACCC ATTCAACCGC TGATCATCGG TGATGTCGAT
AAAACGGTGT GGGTTGCTCA GCAGTTAAAT GAGTCCGGGA TCTGGGTCGG TGCGATACGT
CCCCCAACCG TGCCTAAGGG GAGCGCCCGA TTAAGGATAA CTATCACTGC GATCCACACA
CATGATGAGT TAGACAGGCT CGTCAGCGCC TTAACCCAGG CGCTTGGTTA A
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| Protein sequence | MIVSDVSAGS KAKKHSLSDK IRSKQAQLND AGLLRRRQAL TPIEGETVDF SLNGRHYLNF
SSNDYLGLSQ ASGLLDSLNT GAKRYGVGSG SSPLVTGYSE AHVRLEQTLC QITGHEAGLL
FCSGFSANSA LMKTLFGSGD TVIADKLVHA SIIDGLTDSE ATFKRFLHND IQSADRLIAK
YSPQAVITES IFSMDGDMAP LEALSTSCKR NNSWLIVDDA HGFGIQAALG NYVPASAELA
DVQVVTFGKA LGCQGAAILG SQALIDFLVS NARDYIYSTA LSPANACVAL AAVELTQESD
ERALTLADNI HYFKRACSLA NIGLTESITP IQPLIIGDVD KTVWVAQQLN ESGIWVGAIR
PPTVPKGSAR LRITITAIHT HDELDRLVSA LTQALG
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