| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2774 |
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| Symbol | |
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| ID | 5612411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3344928 |
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| End bp | 3345728 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933693 |
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| Product | biotin biosynthesis protein BioC |
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| Protein accession | YP_001474509 |
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| Protein GI | 157375909 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0014139 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00911196 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCCG AAGTAGTGAG TCATGGGGTA AAACCGACAA TCGATGAGAG CGTGGTAGCC
GAGCGGTTTT CTGCTGCAGC CAAAACCTAC CATAGGCATA ACTGTTTGCA GAAACTCTCC
TGTGAGGCCT TATTCAGCGG TATGCGTCCT AACGGAGCCT TGCTCGATAT CGGGGCGGGA
CCGGGTACAG ATTTCAGTCA GTTTACAGAA CTCTCATCCG TGATAGCGTT AGACATCGCC
GCAGGTATGC TTGAGCAGCT TAATAAAAAT TTCCCTGACT ATGAGACGGT ATGCGCCGAC
GCTAAAACGA TTCCACTGCC AAAAAGCAGT ATCGACAGCG TTTATTCTAA CTTAGCCCTA
CAGTGGTGTG ATGATTTGGC ACAGTCTTTT CACAGTACAG CTAATGTACT CAGACCAGCC
GGAGAGTATC ATTTAGCCGT GGTGGCACAG GGAAGCTTAG CTGAGTTGAC TCAGTTAGGT
TTCAGGGCTA ATGCGTTCCG CGCCTTGTCT GAGATAAGCT CACAGTTCGA TACACAAGAG
TGGCAAATAA AATCGTCAAG GCTCGAGTCG ATGACGGTCT ATTTCGATGA TCTTAAGGAG
CTACTCTATT CCATCAAAGG GGTCGGGGCT TCAATCCATG CCGATGCCAA GGTGAGCAGT
CAGTCTAAAT CTATGGTCAA TCATGGTATA CGCGGACGGG GTGACTGGAT GAAACTCCTC
GAGAAAGCGG AGAAGTTAAG AACGCCACAA GGCATTCCCT TGACCTATCA GATAGCAATC
ATTCGCGCAG TAAAGAGATA A
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| Protein sequence | MKPEVVSHGV KPTIDESVVA ERFSAAAKTY HRHNCLQKLS CEALFSGMRP NGALLDIGAG
PGTDFSQFTE LSSVIALDIA AGMLEQLNKN FPDYETVCAD AKTIPLPKSS IDSVYSNLAL
QWCDDLAQSF HSTANVLRPA GEYHLAVVAQ GSLAELTQLG FRANAFRALS EISSQFDTQE
WQIKSSRLES MTVYFDDLKE LLYSIKGVGA SIHADAKVSS QSKSMVNHGI RGRGDWMKLL
EKAEKLRTPQ GIPLTYQIAI IRAVKR
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