| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2771 |
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| Symbol | |
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| ID | 5612614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3340883 |
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| End bp | 3341626 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933690 |
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| Product | peptidase E |
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| Protein accession | YP_001474506 |
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| Protein GI | 157375906 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3340] Peptidase E |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000609808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00176769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGACTATGA ATGCCTTACT TCTCTCCAGC TCACGTGTTG GAGACACGCC GTATCTTGCC
CACGCCATCC CCTTTATTAA GCCCTTGATC GCTGAGTTGG CGAACCAGAT CGAACCGCAA
AATCAAAAGT GGCTGTTTAT CCCCTATGCA GGCGTCAGTA TCAGCCACGA CGCTTATCTG
ACAAGGGTGA TATCCAGCTT AGGTGAGCTC AATATTGAAA TAAGCGGGAT CCATCAATAT
GAAGATCCCA GACAGGCGGT TCAGCAAGCC GATGGAATAT TAGTTGGAGG GGGGAATACC
TTCAATCTGC TGCATCAGCT GTACAGGCAC GATCTCGTAA AACTCATAGC TAATCAGGTA
AGTGAAGGTA AGCCATATAT AGGTTGGAGT GCTGGCTCAA ATATTGCCGG CCTAAGCATT
CGAACCACCA ATGATATGCC TATCGTTGAG CCAAGCTCCT TTAATAGCCT GGGGATACTC
CCCTTTCAAC TCAATCCACA TTACACCAAC TTCCAGGCCC CGGGTCACAA TGGTGAGACT
CGAGCGCAGC GATTACTCGA ATTTACCTGT GTCGATCCTG TCACTCCCAT CGTCGCCATT
CAGGAGGGAA CGGCATTATG GAGACAGGGA GACAAGCTAT CCCTTATCGG CGACAAACAA
GCCTTCCTGT TTTGCGGCCT GCAGCAGGAG ATACCGATAC CCATCGGTAG TGAGCTTTCC
CACCTATTGA TGCCTCATAA ATGA
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| Protein sequence | MTMNALLLSS SRVGDTPYLA HAIPFIKPLI AELANQIEPQ NQKWLFIPYA GVSISHDAYL
TRVISSLGEL NIEISGIHQY EDPRQAVQQA DGILVGGGNT FNLLHQLYRH DLVKLIANQV
SEGKPYIGWS AGSNIAGLSI RTTNDMPIVE PSSFNSLGIL PFQLNPHYTN FQAPGHNGET
RAQRLLEFTC VDPVTPIVAI QEGTALWRQG DKLSLIGDKQ AFLFCGLQQE IPIPIGSELS
HLLMPHK
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