| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2768 |
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| Symbol | |
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| ID | 5612771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3337785 |
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| End bp | 3338645 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640933687 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001474503 |
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| Protein GI | 157375903 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00920266 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0367818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAACTG CTGAAATCCT TGAACTGACT GGTGTACCTA AGGCGGAAAC CCGGTTGCAG
CGCACCTATA AGCTGGCTAT CGTCGGTGCG GGTTGTGGTG ACATCGAGTT GCTGACACTT
AAAGCGGCAC GGTTAATTTC ATCGGCCGAC GTCATCGTCT ATGACGCACT GGTCAGTGAC
GACATTCTGA GTTTGGCACC CGAAGCGTGT GAGCTACATT TTGTCGGAAA GCGCTGTGGT
CAGCCCAGTG CGAAGCAGGA TGATATCAAT GAACTCCTGC TACGGTGCGC CGTTAGAGGC
TTGAGTGTGG TGCGCTTAAA AGGGGGGGAT CCTAATGTCT TTGGCCGAGG TTGTGAAGAA
GCGCTGTTTT TAGCCAGAAA TGGCTTCGCC AGTGAGTTCA TCCCTGGTGT GACCGCAGCG
CTTGGGTGCG CCGCCAGTGC GGGGATCCCG TTGACACACA GAGGGGTGGC CAGATCTGTG
ACCCTGGTGA CCGGCACTGT TTTTGATGAC AGTGCTGTGT GCTGGCAATC TTTGCTGTCG
GCTCAAACCA GTTTAGTCTT TTATATGGGC AAAGAGCAGG CAGCAAAGAT AGCCCATGGT
TTGTTGAATG CCGGTGCGAA TGTTCAACTT CCCGTGGCAT TTGTCAGTAA TGGCGCACGG
GCCAAGCAAA TATTAACCTA TACCAACTTA GGCAATATGG CCGACACGGC GAGAAAAATA
GGGGTTGCCG GGCCCACGTT AATTATTGTT GGCGCAGTGG TCTCTGTGGG TAAAGAGCTA
TCCGGTTTAA TGGATAGCAT TAGCGATACA AGAGCTGAAC CTGCTCTTGG ACGCTTGGCG
GAAGCCGGGA AACCGGTATG A
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| Protein sequence | MKTAEILELT GVPKAETRLQ RTYKLAIVGA GCGDIELLTL KAARLISSAD VIVYDALVSD
DILSLAPEAC ELHFVGKRCG QPSAKQDDIN ELLLRCAVRG LSVVRLKGGD PNVFGRGCEE
ALFLARNGFA SEFIPGVTAA LGCAASAGIP LTHRGVARSV TLVTGTVFDD SAVCWQSLLS
AQTSLVFYMG KEQAAKIAHG LLNAGANVQL PVAFVSNGAR AKQILTYTNL GNMADTARKI
GVAGPTLIIV GAVVSVGKEL SGLMDSISDT RAEPALGRLA EAGKPV
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