Gene Ssed_2744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2744 
Symbol 
ID5611137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3313597 
End bp3314124 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content45% 
IMG OID640933663 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001474479 
Protein GI157375879 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAA TTCATTTGAT TGTATTGGAA ACATCCAGGT TAATTTTGCG CCATGTAGAG 
ATTGCAGATG CAGATTTTAT TTTGAGTTTA CTCAATACTC AGGGATTTCT TGAGAATATT
GGTGATAGAG GAGTCAGGGA CCTTTTACAG GCTGAAACCT ATCTACTCGA TGGTCCACTG
GCCAGCTATC ATCAGAATGG TTACGGCCTC TATCTCGTTG AGCTAAAAGA GAGTGGTGAA
CCGATAGGTC TCTCCGGCTT GGTGAAAAGA CCACTGTTTG ACAGTCCCGA CCTAGGCTAT
GCACTCTTGC CTGCGTATTG GGGGAAAGGC TTTGCGGTAG AGTCAGCTAA AGCCGTACTC
CTTCATTGTA AAGTACTAGG GCTCAGGCGG GTGCTGGGTA TAGTGAGTCC CGGTAACGAG
GCATCACTTT CGGTGTTAGA AAAAGTCGGA ATGTCTTATA AAGAGAACAT ACTCTGGGAG
GAGGATAATT CGGAAGTACT CATCTATGAG ATCGCTATCG ACTCGTGA
 
Protein sequence
MLEIHLIVLE TSRLILRHVE IADADFILSL LNTQGFLENI GDRGVRDLLQ AETYLLDGPL 
ASYHQNGYGL YLVELKESGE PIGLSGLVKR PLFDSPDLGY ALLPAYWGKG FAVESAKAVL
LHCKVLGLRR VLGIVSPGNE ASLSVLEKVG MSYKENILWE EDNSEVLIYE IAIDS