| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2743 |
|---|
| Symbol | |
|---|
| ID | 5611136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 3312896 |
|---|
| End bp | 3313495 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640933662 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001474478 |
|---|
| Protein GI | 157375878 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAGTG AAGTTCATGC TGAGTGTTTA TCCGGAGAAC ATATTCTGCT CGAACCATTG
AGTTTAGAGC ATATTCCCGC GCTTTCTCTG GCGGTCTCAG ACGGAGAACT TTGGCAGTTA
TGGTACACGA GCGCCCCTCA TCCTGATGAG ATGAAAGAGT ATATTGAAAC GGCATTAGCC
GCAGAGGAAA GAGGAGAAGC ATTATCTTTT GCCGTACGGG ATAAACTTTC CGGTGAGATC
ATCGGCTCGA CGCGGATCTG CAATTGGGAT CAGGCAAACA GGCGTTTGGA AATAGGTTAT
ACCTGGTATG CCAAGCGCGC ACAAAGAACC AGTGCTAACA CAGAGGCAAA GCTGTTAATG
CTGGAGTATG CTTTTGAAAC GTTAGATGTC ATGGCGGTGG AGTTTAGAAC CCACTGGCAT
AATCAAGCCT CAAGAGAAGC CATCACGCGT CTCGGTGCTA AACAAGATGG TGTACTGAGA
AATCATAAAT TGCTAAGTGA CGGTACCGTC AGAGATACGG TGATCTATTC GATCATTGAT
AGCGAATGGG CTGCGGTGAA ACAGAATTTG AAGTTCAGGA TGCAGAAATA TCAAATGTGA
|
|---|
| Protein sequence | MKSEVHAECL SGEHILLEPL SLEHIPALSL AVSDGELWQL WYTSAPHPDE MKEYIETALA
AEERGEALSF AVRDKLSGEI IGSTRICNWD QANRRLEIGY TWYAKRAQRT SANTEAKLLM
LEYAFETLDV MAVEFRTHWH NQASREAITR LGAKQDGVLR NHKLLSDGTV RDTVIYSIID
SEWAAVKQNL KFRMQKYQM
|
|---|
| |