| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2733 |
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| Symbol | |
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| ID | 5613812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3301602 |
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| End bp | 3302834 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933652 |
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| Product | putative alcohol dehydrogenase |
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| Protein accession | YP_001474468 |
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| Protein GI | 157375868 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0334328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA ATACTAAAAG TATGATATTT TCTCTTCAGG TTATCGCCTA CAAGGGCTAT
ATGAATGTTT TAAAAACAGC AGCCAAGATC ATTCCGATGC CTAAGCCAAC GCTGTTTACC
GGTTCCGGTT CCTCATTGAA ACTGTGTGAA GCTATCGCTC AGATGGGAAC TAGTAAGGTG
TTGATTGTTA CCGACACGGT TCTGATCAAG CTAGGCCTTC TAGACAATAT TCAACAGAAG
TTAACGGACA ACAATGTTCA ATTTGCCGTA TATGATGGGG TACTTCCCGA TCCGAATTAC
GCGCAGGTAG AATCTGGTTT AGCCCTATAT AAAAGTAGTG GCTGCGATGC AATCCTGGCT
GTAGGCGGTG GCTCTCCGAT CGATGCGGCT AAGGTTATTG CCGCCCGGGT TAATAACCAT
CGCGAGATAA AAAAATTAAC AGGTCTATTT AAAGTTTGGA AAGCCCCAGC CCCCTTATTT
GCAATTCCGA CGACTGCGGG AACGGGCTCT GAAGTCACCA TAGCTGCTGT GGTTTCCGAT
CCAGTCACTC ATAAAAAGAC ACCACTCATA GATCCCAAAC TCGTCCCTAT GATGGCATCA
CTGGATGCAT CGTTAATGAC AGGTTTGCCC GCTCATGTGA CGAGCGCGAC GGGCATGGAT
GCATTAACCC ATGCGGTTGA AGCGTTTATC TCGATGAACG CCTCTTCCGA TACCGATGCC
TATGCCATTG CTGCGACGAA ATTGATTAGT CAAAATTTAT CAATCGTTGT CCACAATGGA
ACCAATCTTG AGGCTCGGCA GAATATGGCA ATGGCGTCTT ACTATGCGGG TTTGGCGTTT
ACGAAAGCGA GTTTAGGTTA TGTTCACGCA ATATCTCATA ATCTGGGGGC AAAGTATGGC
ATACCGCATG GCTTGGCTAA TGCTATTGTA TTGCCATATG TACTCGAATA TTCAAAGGCC
GAAATCGCAC CGCGTTTGGC CAAATTATCA CGAGTTTGTG GATTAGGAAC TGCTGGAGAC
TCAGATAAAG AACTGGCTCA ACTATTTATC GATCACATTC GAAGTATGTT GAAGGAATAT
GGAATTTCTT CACAGCTCGA TGCGTTAAAG ATTGAGGATG TGGCAGAGAT CGCCCAAGCG
GCACTCAAAG AGGCGCATTT TAACTATCCA GTGCCTAAGT ATATGGATCA AACACAATGT
GAGAAACTTA TCGGACAGAT GCTGGTGTCA TAA
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| Protein sequence | MNKNTKSMIF SLQVIAYKGY MNVLKTAAKI IPMPKPTLFT GSGSSLKLCE AIAQMGTSKV
LIVTDTVLIK LGLLDNIQQK LTDNNVQFAV YDGVLPDPNY AQVESGLALY KSSGCDAILA
VGGGSPIDAA KVIAARVNNH REIKKLTGLF KVWKAPAPLF AIPTTAGTGS EVTIAAVVSD
PVTHKKTPLI DPKLVPMMAS LDASLMTGLP AHVTSATGMD ALTHAVEAFI SMNASSDTDA
YAIAATKLIS QNLSIVVHNG TNLEARQNMA MASYYAGLAF TKASLGYVHA ISHNLGAKYG
IPHGLANAIV LPYVLEYSKA EIAPRLAKLS RVCGLGTAGD SDKELAQLFI DHIRSMLKEY
GISSQLDALK IEDVAEIAQA ALKEAHFNYP VPKYMDQTQC EKLIGQMLVS
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