| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2732 |
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| Symbol | |
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| ID | 5613811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3300163 |
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| End bp | 3301068 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933651 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474467 |
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| Protein GI | 157375867 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.206778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATAATA AATTGTCTAA AAATATCCTT AATATATTAC TGCTTAGCGC TGGTGTTGGA
GGACTATTAA CTGGTTTCGC CAGTGCAACC GAAGGTGGTG GTGGCGCTTA CCCTAACGGT
GCGGAAGGCA TCATGGCGGG GGCTTTGCCG CCTCCGGGAT TTTATTACGT CAACTACGCG
ACTCACTATA ACGCCGATGG TGCGCAACTG CCTGTCGATC TGAAACTCGA TGTGTCGGCG
AATGTCTCCC GTTTTGTTTA TATGACAGAA CATAAGCTGT TCGGTGCCGA TTACGGAACC
TACATGGTTG TGCCACTGCT CCATGTCAGC GCCATGCTGG ATACCCATTC ACCTGCCGGT
ACTATCAGCA GCACTGAGAG TGGTTTGGGG GACATTGCAT TTTCGCCGCT TGTTCTCGCC
TGGCATTCAA AAAACTGGCA TGTTGCCACA GGCCTGGAGT TTGTCGTTCC AACCGGAGAT
TATGACAAGC ACAACCTGGC TAATTTGGGT CGAAACTATT GGACAATTGA GCCTGTTTTT
GCAGCGACCT ATATCACTGA CTATGGGCTG GAGTTGTCGG GTAAGTTTAT GTACGACTTT
AATACCGAGA ATAGCGATAC CGATTACAAA TCCGGTCAGG AGTTTCATGT TGACTACGCA
GTGGCATACC ACACAGGTCC CTGGACATTA GGTGTCGGCG GTTACGTTTA CAAGCAAACA
ACCTCAGACA GTGGCGCGGG GGTTACCGAC CCCGATGGCA ACAAGGGACA GGTACTGGCG
ATAGGCCCAA GCGTGAAATA TGATCTTGCC GGTTTGAGCA TCGAAGCCAA ATATCAGGAG
GAGATATGGG TCGAAAACAG GCCGGAAGGT AACAAGTTAT GGCTTAAAAT GAGCTTACCT
TTATAA
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| Protein sequence | MHNKLSKNIL NILLLSAGVG GLLTGFASAT EGGGGAYPNG AEGIMAGALP PPGFYYVNYA
THYNADGAQL PVDLKLDVSA NVSRFVYMTE HKLFGADYGT YMVVPLLHVS AMLDTHSPAG
TISSTESGLG DIAFSPLVLA WHSKNWHVAT GLEFVVPTGD YDKHNLANLG RNYWTIEPVF
AATYITDYGL ELSGKFMYDF NTENSDTDYK SGQEFHVDYA VAYHTGPWTL GVGGYVYKQT
TSDSGAGVTD PDGNKGQVLA IGPSVKYDLA GLSIEAKYQE EIWVENRPEG NKLWLKMSLP
L
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