| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2729 |
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| Symbol | |
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| ID | 5611240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3295599 |
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| End bp | 3296162 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933648 |
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| Product | phosphodiesterase |
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| Protein accession | YP_001474464 |
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| Protein GI | 157375864 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0622] Predicted phosphoesterase |
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| TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.757572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTTT TTTTTGCCTC CGATCTCCAT GGCTGCTTCG ATAGCACTTC ACAAATGATC
GCCGCGTTCG AGCGAAGCGG CGCCGAACAT CTGATCTTAT TAGGGGACAT ACTCAATCAC
GGTCCCAGAA ATGCGCTGCC ATCAGGCTAT GCACCGATCA AGGTGGCAGA ACTGCTGAAC
CAATACGGTG ATAAAATTAT CGCCGTAAGA GGAAACTGTG ACAGTGAGGT TGACCAGATG
CTACTCGATT TTCCTATGAT GTCTGACTAT AACTTGGTGC TGCTGCCAAA CGGTCGACGT
CTGTTTTTGA CCCATGGTCA TCTATATAAC AGTGATAGCT GTAACAGTAA TAAGCATCCA
CGTTTGTGCC CTGGTGACAT CATCGCCTCC GGTCATACTC ATCTTCCTGT CGCTGCACCA
AAGGGTGATT TTATCGAATT TAATCCAGGC TCTGTGACCA TCCCCCGTGG CGGACATGTT
GCCAGCTATG GATTACTTGA GGACGACACC CTGTCGGTAA TGAGCTTCGA TGGAAAAGAG
CTCTGCTCTG TGCGCCTCGA TTAA
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| Protein sequence | MKLFFASDLH GCFDSTSQMI AAFERSGAEH LILLGDILNH GPRNALPSGY APIKVAELLN
QYGDKIIAVR GNCDSEVDQM LLDFPMMSDY NLVLLPNGRR LFLTHGHLYN SDSCNSNKHP
RLCPGDIIAS GHTHLPVAAP KGDFIEFNPG SVTIPRGGHV ASYGLLEDDT LSVMSFDGKE
LCSVRLD
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