| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2728 |
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| Symbol | |
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| ID | 5611239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3294791 |
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| End bp | 3295483 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640933647 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474463 |
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| Protein GI | 157375863 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1794] Aspartate racemase |
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| TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.881231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAACAA TTGGCATGAT AGGCGGAATG AGTTGGGAGT CTACGGTAAG TTACTACAAG
GCGCTCAATG AAGGGGTAAA GCAAAACCTT GGTGGGCTAC ACAGTGCGAA AATAGCACTC
GTTAGTGTCG ATTTTGCCGA AATAGAGCGG TTGCAACACT CAGGCGAGTG GGGCAAGACG
GCGGATATTC TTAGCGATGC TGCCGTTTCG GTCGAAGCAG CCGGCGCCGA TTTTTTCATG
ATATGCACTA ATACCATGCA TAAAGTTGCC GATGAGATCA GTGCTAAGGT GTCTATTCCG
CTGCTGCATA TTGCCGATGC CACGGCTGAG CAGTTAGTCA GTGACGGGGT GAAAAAGGTT
GGCCTGCTGG GTACCCAATT TACCATGGAG CAAGAGTTCT ATCGTGGGCG TCTGACGGAC
AGGTTCGGTA TCGAAGTGGT GATCCCAGAT AGCGCACAAC GAGAGCGTGT GCATCAGATC
ATCTATGAAG AGCTTTGTCA GGGCCAAGTG AATACCACAT CTCGTGAAGC CTATCTCGCT
ATCATTCAAG ATCTACAAGC ACAGGGAGCC GAAGCCGTCA TTCTCGGTTG CACCGAAATT
GCCCTGTTGG TGTCTCAACA AGACACCGAA GTACCGCTTT ATGACACCAC AGAGATCCAC
GCCAAAGCCG CAGTTCAACT GGCGCTCTCA TAG
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| Protein sequence | MKTIGMIGGM SWESTVSYYK ALNEGVKQNL GGLHSAKIAL VSVDFAEIER LQHSGEWGKT
ADILSDAAVS VEAAGADFFM ICTNTMHKVA DEISAKVSIP LLHIADATAE QLVSDGVKKV
GLLGTQFTME QEFYRGRLTD RFGIEVVIPD SAQRERVHQI IYEELCQGQV NTTSREAYLA
IIQDLQAQGA EAVILGCTEI ALLVSQQDTE VPLYDTTEIH AKAAVQLALS
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