| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2717 |
|---|
| Symbol | |
|---|
| ID | 5611211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 3282624 |
|---|
| End bp | 3283061 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640933636 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_001474452 |
|---|
| Protein GI | 157375852 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTATC AATTGAAAGT AGAATTATCA GTTTCACCTT CAGAAGAAGA GCTGAAAGCA
ATCGGTGATG GTATTGCAGC ATTCAATGAG CCATTTTTGC CTAATGATGG TGCTTTTGAT
TCGGGGTTTC GTTTTGCTCT CATTGTGCGA AATGACAGTG GCGATATAGT TGGTGGGATT
CAAGCAAGTG TAGTTTGGAG TTACTGTGTC CTTGAGTTGC TCTGGTTGTC AGAAGGAATG
AGAGGTAGTG GTGTTGGATC AAAACTAATG CATCAACTAG AAGATTTCGC AAAAGAAAAA
GGTCTTAGCC AAATTCGTAC AGAAACGCTA GATTTTCAAG CTAAGCCATT TTACGAAAAG
TTAGGTTACC GTGTTTATGG TGAACTAGAA AACATACCAA AAGGGCACAC TACTTACTTT
TTGGCTAAGA ATCTATAA
|
|---|
| Protein sequence | MEYQLKVELS VSPSEEELKA IGDGIAAFNE PFLPNDGAFD SGFRFALIVR NDSGDIVGGI
QASVVWSYCV LELLWLSEGM RGSGVGSKLM HQLEDFAKEK GLSQIRTETL DFQAKPFYEK
LGYRVYGELE NIPKGHTTYF LAKNL
|
|---|
| |