| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2707 |
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| Symbol | |
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| ID | 5614090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3272230 |
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| End bp | 3273459 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933626 |
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| Product | NADH:flavin oxidoreductase |
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| Protein accession | YP_001474442 |
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| Protein GI | 157375842 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATTG ACCGCCGTAC GTTAATCAAG TTTATGGGAA TGGCCGTTGC AGGCGCTCCT
GTCGGAGTAT CATTCGCCAA CAGTAACGCC GATTCATCGA AGCGCAAGCT CTTTGAAGAG
ACAAAACTGG GCACCTTAAC CCTGAAGAAC AGACTCATCC GTTCAGCAAC ATCACAATAT
CGCGCCACGG TTGATGGTGA TCCCACTGAA GATTTAATGC GGGTTCATCG CGAGCTGGCA
GAAGGTGGAG TCGGTCTTAT TATCACTGGT CTGACTTATA TCTTAAAAGA AGATCAGTAT
GGTCAAGCCG GAACAGGGTT ATACGACGAC TCTCAGATAG AACTGTACAA AAAAGTTGTT
GAAAATGCCC ACGAACACGG CTCAAAAATC GCAGTTCAGT TGGCTATGGT TGGTCCGCAG
AGTGATTATC GAATCGATCA CCGCGATGTA TACGGTGCAT CGAAAGTACC TCATCCAATC
TATGGCACTG TGCCAAACAA AGTCATGACC AAGCAAGACA TTGAATATTC GCTTCAGGCA
TTTATCGATG CAGCCATCAG AGCTAAGAAA GCAGGATTCG ATGCCATTGA GTTGCACTTC
GCCCACAATT ATCTGGTGAG TCAATTCTTA TTCCCTTATT ACAATGACCG TACTGACGAA
TATGGTGGCC CAATAGAAAA TCGTGCCCGC TTTGCGTTTG AAATTTTAGA GGCCGTACGT
GGAGCTGTCG GCCCTGACTA CCCAATCATT GCAAAGGTAC ATGGCCGAGA CTATCTGGGT
AGCCAAGCTG GCGGTAACAC CCAAGATGAA AACCTTTATG TCATTAAAGG TTTAGTTAAG
CGGGGTATCA CGGCATTAGA TATTAGTGGT GGTAATAAAG TACGTGGAAT GGGGGAGTTC
CATCCGGAAA TCCAAGACGA AAAAGATCAA TCCTACTTCG CCAATGATGC CAAATATATC
AGTGAGCATG TGGATGTTCC AATGATGGTG ACAGGTGGTA ACCGTTCGCC AAAACTAATG
GAAGAAATTC TTGCTGAAGT TAAAAATGTT GAAGCATTTG GCTTCGGTCG GACCATGTTG
TCAGAGCCAA ATCTAGCTAA TAACTGGAAA CAAGATCCAA ATCATAAGCC AAGATGTTTG
TCGTGTAACT GGTGTATCGC CAATTACGGC ACGCAAAAAT CTCAGTGTGT TTTAAATGTA
TCCCGCGCCT ATATTCCTGC TGGACATTAA
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| Protein sequence | MSIDRRTLIK FMGMAVAGAP VGVSFANSNA DSSKRKLFEE TKLGTLTLKN RLIRSATSQY
RATVDGDPTE DLMRVHRELA EGGVGLIITG LTYILKEDQY GQAGTGLYDD SQIELYKKVV
ENAHEHGSKI AVQLAMVGPQ SDYRIDHRDV YGASKVPHPI YGTVPNKVMT KQDIEYSLQA
FIDAAIRAKK AGFDAIELHF AHNYLVSQFL FPYYNDRTDE YGGPIENRAR FAFEILEAVR
GAVGPDYPII AKVHGRDYLG SQAGGNTQDE NLYVIKGLVK RGITALDISG GNKVRGMGEF
HPEIQDEKDQ SYFANDAKYI SEHVDVPMMV TGGNRSPKLM EEILAEVKNV EAFGFGRTML
SEPNLANNWK QDPNHKPRCL SCNWCIANYG TQKSQCVLNV SRAYIPAGH
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