| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2697 |
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| Symbol | |
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| ID | 5611763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3260001 |
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| End bp | 3260849 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640933616 |
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| Product | aldose 1-epimerase |
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| Protein accession | YP_001474432 |
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| Protein GI | 157375832 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.459697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTCTG TAACGACAAA AAAACACGCC AGCGGATTAG AATATGTGGA CGTTGATACG
CCACTGTGCA AGGCGAGAAT TTTTATGCAA GGCGCTCAGA TTGATCTCTT TCAACCTAAA
GGGAAAAAGC CGCTACTCTG GGTCTCCTCT GCCGACGATT ATCAGCCGGG CAGTGGTATA
AGAGGCGGGA TCCCTATCTG CTGGCCCTGG TTTGGCATGA GTGACAACCC TGACTGGCCG
CAACATGGCT TTGCACGTAC CAGCCTGTGG ACACTCGAGT CGGTGCAGAT GCGCGAAGAA
GCGGTAGAGC TTAAATTCGC GCTGGCGATC ACTGAAGAAA ACAATCAATA TTGGCCACAC
GACACCCGGG TAGAGGTAAT ATTTACCCTG GCAGAAACAC TAACGGTCTC CTTAATCAAT
ACTAACTTGG GTAACGAGCC AGTCAGCCTG ACTCAGGCAT TGCATACCTA CTTCCCGATC
GATGATATTC ATCGGCTAAG CGCGAGCGGC TTTGAAGGCT CACAGTACAT AGAGTTCGGT
GAAGGGCCCT ATCAACAGCC CGGAGATGAG GTGAAATTTG ACAGAGAGAC TGACCGGGTT
TATACCCAGC TTGGCCAAAA TCAACGGCTT CATACACCGG ATGGAACTAT CGAGGTCAGC
CGCGAAAACA GTCAGTCGGC GGTACTGTGG AATCCATGGA TAGATAAGTC ACAGCGCCTG
TCACGCTTCA ATAGTGATGA CTACCTCAGC ATGGTGTGTC TTGAAGCGGC CAACGTACTT
GAGGACAAGG TTACCCTTAA GCCCGGTGAG TCCCACACAT TAACCACTAA GATTGGTTGG
AAAGCGTGA
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| Protein sequence | MGSVTTKKHA SGLEYVDVDT PLCKARIFMQ GAQIDLFQPK GKKPLLWVSS ADDYQPGSGI
RGGIPICWPW FGMSDNPDWP QHGFARTSLW TLESVQMREE AVELKFALAI TEENNQYWPH
DTRVEVIFTL AETLTVSLIN TNLGNEPVSL TQALHTYFPI DDIHRLSASG FEGSQYIEFG
EGPYQQPGDE VKFDRETDRV YTQLGQNQRL HTPDGTIEVS RENSQSAVLW NPWIDKSQRL
SRFNSDDYLS MVCLEAANVL EDKVTLKPGE SHTLTTKIGW KA
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