| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2694 |
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| Symbol | |
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| ID | 5611782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3254311 |
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| End bp | 3256446 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933613 |
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| Product | phosphatase/nucleotidase |
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| Protein accession | YP_001474429 |
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| Protein GI | 157375829 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CTAATCGCAG TGTACTGTGC TTAGCCGTAC TCGCTGCTTT AGCCGGGTGC
TCGGATGATG AGACAATAAT TAATACGGAC AGTGGTTATG CACCTGTGGT AACACAAGGT
AAAACACTGA CTAACACACC CGATATCGTA GTTAAGAGTC AAAACGAAGT CGACGAAGTC
ACCATTACTA TCGGTGCAAC ATCGGATCTT CACGGTCGTA TCTTTGGATA TGACTATGCT
CTCGATGCGG TCGATTCAGA TGCAGGTCTG ACACGTATCT CAACCTTGCT TGAAACCGAA
AAAGCAAATA ATCCAAATAT GATCTTGATC GATATCGGTG ATACCGTTCA AGGCAACTCG
GCTCAACTCT TCAACGATGA CCCAACTCAC CCTGTCGTTT CTACCTTAAA CTCATTGGGT
TTCGACCTAT GGGTTCCAGG TAACCATGAA TTTAACTTCG AACGCAGCTT TATCGACCGT
AACCTGAACC ATTTCAACGG TGCAGTTGTA TCGAATAACA TCAAGTGGGA AGAGAACAGT
GCGAACTACA TTCGTGCTTT CCAGATCTTT GAAGTCGATG GCGCTAAGGT TGCCATCGTT
GGTGTGACAC CATCTAACGT GCCTAACTGG GAAGCTTCTG CACCCGGACA CTTTGCCGGT
CTAAAGTTTG ACGAAGAGCT GGCCTCTACC CGTGCAGCAG TTGATGAGTT GATCGAAAAA
TTCAACCCTG ATGTCATCGT CGGTGCTTTC CATATCGGAC GTAGCTCAGA AGGCGGTGCC
GGTGTTCACA AGATTGCTGC AGAGATGGCA GATAAGTTTG ACGTGATTCT AGCTGGTCAC
GAACATGCGA CCTATATCGA AAGCATTCAA AAAGCAGCTG AAGGTGAAGA TATCACTTCT
ACCGATATCT CCGTCGAAGG TGGTGATACT GCCGAAGATA AGACACTTTC AGGTACCTAT
GATGAATCTA ACCGCGCTCA AAGCGTTAAG ATCATCGAAC CAGGTAAATG GGGTTGGGCG
CTGGCTAAGG CTGACATCAA GCTTAAGAAG AACACCGATG GCAAGTGGGA GATGGTCGAT
ACGACATTAA GCAATGTCAC ATCTAAAAAT ATCGAAGAAA GTCAGACTAC AAGTTCGCAG
TTCCAGTATG TTCATGACAT CTCTAAGGCC GATGCTCAGC TAGTTCTTGG CCTGGTCGGT
GGTGACTTTA CACCGGGTAC CGGTGCCGAT GAAGCCGTAC ATGAAGACTA CGATCACGAA
ACCGGTCGTC TATATTCAAC GATTCATACC GCTAAAGTCA TGGATACGCC GTTGATGGAC
TTCATCAACC AGATCCAGCT TGAGAAATCT GAAGCCGTAG TCTCTGCAGC GTCACTATTC
TCTGATAGCT CTAACCTGAT TGATGGCCAA GAGTACGCTA AGAAAGATTC GACTAATCTC
TACAAGTATG ACAATACCCT TATCGGTATC AACATGACTG GCGCAAACCT CAAGCGCTAC
ATGGAGTGGT CTTACACTTA CTTTAATACC TATAAAGACG GTGACATTAC CGTATCCTTT
AAGAAAGGTG CTAAAGCTTA CATGTACGAT CAGTTCGACG GTAAGATTGA CTTCGTTGTC
GACCTGACTG GCGATTCATT TGCTATGGAT GAGAACTATA CGGTAACAAA TGAAGGTAGC
CGTATCGAAA TCATCGAGCT CGATGGTAAG CCATTCGATG CTACAGCAAC CTACAAGGTC
GCCTTGAACA GCTACCGTTG GGGATCAAAT ATCAAGAAGT TTGGCTGGGC AACCGGTGAT
GATGTTTATT ATGATTCAGT CAACGAGCCA GTTTACGCTA TCCGTGACAT GCTCACAGAA
TATGTTGCTG CCAACCAAGG CGTTAACGCC AGTGATTTCA CTAATCCTAA CTGGGAGATT
AAACAGTACC AGGATAATGG CGCTATCACC CTACTACGTA CAGACAATGG CGCAGGTCAG
ACACTGTGGA ATAGACTGGT AAGCAAAGAT ATCTGTGTCA AGATTGACCC GGATAATCCT
AAATATCCAG GAATTTTGGA CGCGGTTAAT GTTAATGACG CGACCTCATA CTTTGTCAAC
CCGACAAAAG ATTATGCAGG TTGTGTAACT GAGTAA
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| Protein sequence | MKKTNRSVLC LAVLAALAGC SDDETIINTD SGYAPVVTQG KTLTNTPDIV VKSQNEVDEV
TITIGATSDL HGRIFGYDYA LDAVDSDAGL TRISTLLETE KANNPNMILI DIGDTVQGNS
AQLFNDDPTH PVVSTLNSLG FDLWVPGNHE FNFERSFIDR NLNHFNGAVV SNNIKWEENS
ANYIRAFQIF EVDGAKVAIV GVTPSNVPNW EASAPGHFAG LKFDEELAST RAAVDELIEK
FNPDVIVGAF HIGRSSEGGA GVHKIAAEMA DKFDVILAGH EHATYIESIQ KAAEGEDITS
TDISVEGGDT AEDKTLSGTY DESNRAQSVK IIEPGKWGWA LAKADIKLKK NTDGKWEMVD
TTLSNVTSKN IEESQTTSSQ FQYVHDISKA DAQLVLGLVG GDFTPGTGAD EAVHEDYDHE
TGRLYSTIHT AKVMDTPLMD FINQIQLEKS EAVVSAASLF SDSSNLIDGQ EYAKKDSTNL
YKYDNTLIGI NMTGANLKRY MEWSYTYFNT YKDGDITVSF KKGAKAYMYD QFDGKIDFVV
DLTGDSFAMD ENYTVTNEGS RIEIIELDGK PFDATATYKV ALNSYRWGSN IKKFGWATGD
DVYYDSVNEP VYAIRDMLTE YVAANQGVNA SDFTNPNWEI KQYQDNGAIT LLRTDNGAGQ
TLWNRLVSKD ICVKIDPDNP KYPGILDAVN VNDATSYFVN PTKDYAGCVT E
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