Gene Ssed_2693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2693 
Symbol 
ID5611806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3253121 
End bp3253726 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content44% 
IMG OID640933612 
Producthypothetical protein 
Protein accessionYP_001474428 
Protein GI157375828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.591269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAC TCCCCTTCTC TCAATCATGT GAAAACAATA AAGGCCCGAT ACTGGAGGTC 
ATTAAGCGTG CTTTTGCGCA ATCGACCCAT CTCTTAGAGA TTGGCACCGG CAGCGCACAG
CATGCGACTT ATTTTGCCAG GCATCTGCCT CATCTTATCT GGCAAACCAG CGATCAAGCG
GCCTATCTAG AAGGGATAGA GATGCGCTTA GCCCAGACAA ACCTCCCCAA CCTAAAAGAC
CCATTGGTAT TGGATGTCTC CAAGGTGTGG CCATTAGCTA ATTCAAACAG TATCGATGCT
ATCTTTACCG CCAATACCCT ACATATCATG TCGAAAGAGA TGGTTGAAGC TTTCTTCTGC
GGTATAGGCA AATATTTAGC TCCAAAAGGA CAACTGTGTA TATACGGTCC ATTTAATTAT
GGAGGCGAGT ACAGCAGTGA GAGTAATGCC AGATTCGACA TATGGTTAAA AGATAGAGAT
CATCGCAGTG CGATTCGAAA TATCGAATGG ATACATGAGC TGGCTAACAT GCATGGGCTT
AAATTTTGTG CAGATCATCC CATGCCGGCA AATAATCGAT TACTTCACCT GACAAAAATA
GTATGA
 
Protein sequence
MNQLPFSQSC ENNKGPILEV IKRAFAQSTH LLEIGTGSAQ HATYFARHLP HLIWQTSDQA 
AYLEGIEMRL AQTNLPNLKD PLVLDVSKVW PLANSNSIDA IFTANTLHIM SKEMVEAFFC
GIGKYLAPKG QLCIYGPFNY GGEYSSESNA RFDIWLKDRD HRSAIRNIEW IHELANMHGL
KFCADHPMPA NNRLLHLTKI V