Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2693 |
Symbol | |
ID | 5611806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3253121 |
End bp | 3253726 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640933612 |
Product | hypothetical protein |
Protein accession | YP_001474428 |
Protein GI | 157375828 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.591269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAAC TCCCCTTCTC TCAATCATGT GAAAACAATA AAGGCCCGAT ACTGGAGGTC ATTAAGCGTG CTTTTGCGCA ATCGACCCAT CTCTTAGAGA TTGGCACCGG CAGCGCACAG CATGCGACTT ATTTTGCCAG GCATCTGCCT CATCTTATCT GGCAAACCAG CGATCAAGCG GCCTATCTAG AAGGGATAGA GATGCGCTTA GCCCAGACAA ACCTCCCCAA CCTAAAAGAC CCATTGGTAT TGGATGTCTC CAAGGTGTGG CCATTAGCTA ATTCAAACAG TATCGATGCT ATCTTTACCG CCAATACCCT ACATATCATG TCGAAAGAGA TGGTTGAAGC TTTCTTCTGC GGTATAGGCA AATATTTAGC TCCAAAAGGA CAACTGTGTA TATACGGTCC ATTTAATTAT GGAGGCGAGT ACAGCAGTGA GAGTAATGCC AGATTCGACA TATGGTTAAA AGATAGAGAT CATCGCAGTG CGATTCGAAA TATCGAATGG ATACATGAGC TGGCTAACAT GCATGGGCTT AAATTTTGTG CAGATCATCC CATGCCGGCA AATAATCGAT TACTTCACCT GACAAAAATA GTATGA
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Protein sequence | MNQLPFSQSC ENNKGPILEV IKRAFAQSTH LLEIGTGSAQ HATYFARHLP HLIWQTSDQA AYLEGIEMRL AQTNLPNLKD PLVLDVSKVW PLANSNSIDA IFTANTLHIM SKEMVEAFFC GIGKYLAPKG QLCIYGPFNY GGEYSSESNA RFDIWLKDRD HRSAIRNIEW IHELANMHGL KFCADHPMPA NNRLLHLTKI V
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