| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2674 |
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| Symbol | |
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| ID | 5612216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3231227 |
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| End bp | 3232099 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933593 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474409 |
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| Protein GI | 157375809 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00152058 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0371695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCAA TGGATAACCT CTCTCACGCT CAAAAGCAGC GCCTCGCTTT TATCGACTTT
AGTTTGCAGT ATTTTGGCCA GGTATCTCGT CAGGATCTTA TTAAGAAATT CGCAACGGGC
CTGGCCGCAG CGACGCGTGA CTTTGCCAGT TATCGGGAGT TTGCGCCGGA TAATATGAGC
TTGGTTCACC AGACGAAGAG TTACCATAGA AAACCGGAGT TTAAAGCCCT GTTTCAGCAT
GAACCCGAAG GCATTTTACA TGGTTTAGCG AAAGGCTTTG GTGATGGGCT ATCTCAGCCT
ATTTCGCCCA GTGAAATATG TGTCGATGCG ATACAGTTGA TCCACCCGAA TACCGAAATT
ATTGCGGCAT TGATGCGCGC GATTCAAAGT AAAAGGGCCT TAAAAGTTAA GTATGTCTCG
GTCTCCTCGG GTGAAAAAGA TCGCGAGATA GTGCCTCATG CTCTGGTTAA TAATGGTCAG
AGGTGGCATG TCAGGGCATT CGACAGGACT CACCAAGTAT TTACCGATTT CGTGGTGACC
CGTATCAAAG CTATCTCAAG TGCAAGTTGT GAACCTAAGT TCAATGAGAC TCAGGTAAAA
GACACTCAAT GGGATAATAT GATCACTTTA AATCTTGTCC CTCATCCAAG TCTCGACCAC
CCTGAAGCGA TCGCACTAGA TTATCAGATG CAGGATAACA AGTTGGAAGT GGTGACAAGA
GCGGCGTTAG CGGGGTACCT GTTAAGGCAA TGGAGCGTAG ATTGTTCTGC AAAACATCAA
ATTAGCTCAG GAGTGTGCCA ATTAGCCTTG TCGAATCTGG ACGTTCTCAG CCAGATTGAA
CACCTTACCA TAGTGCCAGG TGGCGGGCGA TAA
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| Protein sequence | MNSMDNLSHA QKQRLAFIDF SLQYFGQVSR QDLIKKFATG LAAATRDFAS YREFAPDNMS
LVHQTKSYHR KPEFKALFQH EPEGILHGLA KGFGDGLSQP ISPSEICVDA IQLIHPNTEI
IAALMRAIQS KRALKVKYVS VSSGEKDREI VPHALVNNGQ RWHVRAFDRT HQVFTDFVVT
RIKAISSASC EPKFNETQVK DTQWDNMITL NLVPHPSLDH PEAIALDYQM QDNKLEVVTR
AALAGYLLRQ WSVDCSAKHQ ISSGVCQLAL SNLDVLSQIE HLTIVPGGGR
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