| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2671 |
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| Symbol | |
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| ID | 5612213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3229267 |
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| End bp | 3230280 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933590 |
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| Product | glutathione S-transferase domain-containing protein |
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| Protein accession | YP_001474406 |
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| Protein GI | 157375806 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0435] Predicted glutathione S-transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0021828 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0114712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTAC TTCAAGATGG TGTGTGGAAA GACCAGTGGT ATCCAACCAA AGAGAACGGC
GGTAAGTTCG TTCGTGAGAA GTCACAGTTC AGGCACAGGA TAACACCAGA AGGAGGGTCT
GTTGATGAAA ATGCCCCTGA ATTTATCGCC GAAGCGCAGC GCTATCATCT CTATGTATCC
CTCGCCTGCC CGTGGGCGCA CCGAACCTTG ATATTCAGGG AGCTAAAATC TCTGCAAGCC
TATATCAGCG TCTCTGTTGT TGAGCCCCAT ATGTTACATA ACGGATGGGA GTTCTCCGGC
CCGAATCAAA GCGATGCTGC TTCTCATATC AAAGGGGCTG AAACCGACAG GCTCAATGGC
AAAGATTTCC TATATCAAAT CTATCAGGCA GCGTCCTCTG ATTACACAGG ACGGGTAACC
GTACCCGTAC TCTGGGACAA GAAAACCAAG ACAATTGTGA ACAATGAATC TTCGGATATC
ATTCGAATCT TCAACTCCGC CTTCAATCAC CTCACCGGGA ATACAGTAGA TCTCTACCCC
GAGCCGCTCA GAGATGATAT CGATGAGGTC AATGACTGGA TCTACTCCTC TATCAATAAT
GGCGTCTACA GAGCCGGGTT TGCAACCAGT CAGGAGGCTT ATAATGAAGC CTTTGACAGT
CTGTTTAACG CTTTAGACAA GGTAGAAAAG ATATTACAAG GGAAGCGATA CTTAACGGGT
GAGATGATAA CCGAAGCCGA TTGGCGTCTG TTTACCACCC TGATCCGATT CGACTCTGTT
TATGTAGGTC ACTTTAAAGC AAACAGACAG ACTATCGAGC AATACCCGGC ATTGTCAGCT
TATCTGAGAG AGTTATATCA GATAGAGGGG ATCGCCGCGA CGGTTAATTT TGAACATATT
AAGCAACACT ATTATTTCAG CCACGCTCAT ATTAACCCGA GCAGAATCGT ACCTAAGGGT
CCGTTTATTG ATTACCATAG TCCCCATGGA CGAGATCTTG TCGACAAGGG CTAA
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| Protein sequence | MGLLQDGVWK DQWYPTKENG GKFVREKSQF RHRITPEGGS VDENAPEFIA EAQRYHLYVS
LACPWAHRTL IFRELKSLQA YISVSVVEPH MLHNGWEFSG PNQSDAASHI KGAETDRLNG
KDFLYQIYQA ASSDYTGRVT VPVLWDKKTK TIVNNESSDI IRIFNSAFNH LTGNTVDLYP
EPLRDDIDEV NDWIYSSINN GVYRAGFATS QEAYNEAFDS LFNALDKVEK ILQGKRYLTG
EMITEADWRL FTTLIRFDSV YVGHFKANRQ TIEQYPALSA YLRELYQIEG IAATVNFEHI
KQHYYFSHAH INPSRIVPKG PFIDYHSPHG RDLVDKG
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