| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2668 |
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| Symbol | |
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| ID | 5612339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3225605 |
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| End bp | 3226048 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933587 |
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| Product | heat shock protein HSP20 |
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| Protein accession | YP_001474403 |
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| Protein GI | 157375803 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000229058 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000680468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCGTAATT ATGATTTAAC TCCCCTATAC CGTAGTGCCA TTGGTTTCGA TCGTTTAGCC
CAGCTTGCAG AGCATGCGGC CTCGAACAAA GGTAACTCAG GGTATCCCCC GTATAATATC
GAACTGCTTA ACGAAAACCG TTATCGTATC ACCATGGCCG TCGCCGGCTT TACAATGGAT
GAACTCGATA TCACCAGCGA AGGCGATAAG CTACTGGTGA AAGGCACTAA AGCTGAGCAG
CAAGAGAAAG AGCGTAAATA CCTCTATCAA GGCATTGCCG AACGTGGTTT CGAGCGTACG
TTTCAGTTGG CAGATTATGT GACCGTAATT GGAGCCAATC TTGAAAACGG CTTACTCAAT
ATCGATCTTC AACGTGAGAT CCCCGAGGCA TTAAAGCCAC GTAAAATTGA GATCGGTACA
TCGAGAGTTA TTGACTCTGA ATAG
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| Protein sequence | MRNYDLTPLY RSAIGFDRLA QLAEHAASNK GNSGYPPYNI ELLNENRYRI TMAVAGFTMD
ELDITSEGDK LLVKGTKAEQ QEKERKYLYQ GIAERGFERT FQLADYVTVI GANLENGLLN
IDLQREIPEA LKPRKIEIGT SRVIDSE
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