| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2659 |
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| Symbol | |
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| ID | 5612626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3215974 |
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| End bp | 3216774 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933578 |
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| Product | band 7 protein |
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| Protein accession | YP_001474394 |
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| Protein GI | 157375794 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.37049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0645118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCCA TCCTTCATAA TGGCGCTATG TTTAGTCTTG CGATAGTATT TCTGGTCGTC
GCACTGCTAT TGAGTGCATT TAGAATTTTG CGAGAATATG AACGTGGAGT CATCTTCCTG
CTCGGGCGTT TTTACAAGGT GAAAGGGCCT GGACTCATCA TCGTTATTCC CATCATTCAA
CAGATTGTCA GAGTCGATCT GCGTACTGTT GTCATGGATG TACCAACCCA AGATGTGATC
AGCCGGGACA ATGTATCGGT CAAAGTGAAT GCAGTGATCT ACTTTAGGGT GATAGATGCT
CAAAAAGCGA TTATCAATGT AGAGGATTAC CTGCAGGCCA CCTCACAACT GGCTCAAACG
ACGCTGCGTT CGGTACTCGG CCAACATGAA CTCGATGAAA TGCTCGCCAA TAGAGAGATG
CTAAATACCG ACATACAAAG CATTCTCGAC ACCCGTACCG ATGGTTGGGG CATTAAAGTC
TCTAATGTTG AGATAAAACA TGTGGATCTC AATGAAACCA TGGTGAGAGC CATCGCACGT
CAAGCCGAGG CCGAACGTAC CCGTAGGGCC AAAGTCATTC ATGCATCCGG TGAGATGGAA
GCCTCGGCAA AACTGGTTGA AGCAGCAACT AAGCTCGCTC AGGAACCCAA TGCTATTTTA
CTGAGATATT TACAGACCCT GACCGAGATT GCCGGTGAGA AAAATTCGAC CATCTTATTC
CCGCTGCCGA TGGACTTGCT CAATGGTGTG CTTAACAAAG ATAAAGATGA GTCATCAAAA
AATTCGGATA AACAGAACTA A
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| Protein sequence | MDPILHNGAM FSLAIVFLVV ALLLSAFRIL REYERGVIFL LGRFYKVKGP GLIIVIPIIQ
QIVRVDLRTV VMDVPTQDVI SRDNVSVKVN AVIYFRVIDA QKAIINVEDY LQATSQLAQT
TLRSVLGQHE LDEMLANREM LNTDIQSILD TRTDGWGIKV SNVEIKHVDL NETMVRAIAR
QAEAERTRRA KVIHASGEME ASAKLVEAAT KLAQEPNAIL LRYLQTLTEI AGEKNSTILF
PLPMDLLNGV LNKDKDESSK NSDKQN
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