| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2657 |
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| Symbol | |
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| ID | 5612624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3213832 |
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| End bp | 3214341 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933576 |
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| Product | YbaK/prolyl-tRNA synthetase associated region |
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| Protein accession | YP_001474392 |
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| Protein GI | 157375792 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2606] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.941629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.15794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATAG CAATGACTCT TGAATCGTTT CTTAACAACA ACAAGGTTAA ATACTCCCTT
GTTAAGCACC GCAAGACCTT ATCATCTCTC GATTCATCGG CATCGGCGCA TCTGCCGAGT
TCTCAGGTAG TGAAAGCTGT CTTATTAGTC AATAACGATG GCGATTACCT GATGGCTGGC
GTGGGATCCG GTCATAGGTT ATCTGTATTA AAGGTCAGTG AGCAGATGGG GGAGGCTTAT
CACCTGGCTG ATGAAGATGA GCTATCGAGT CAGTTTTCCG ATTGTGTTGA AGGTGCCATT
CCGGGTCTCG CCGAGGCGTA TGGGTTAAAA ATGATGTTAG ATAAGCGGTT ATTCGATGAG
GAAAAAGTCT ATCTCGAAGC CGGAGATCAC CGACATCTTA TCGAGATCAA TCATCAGCAA
TATACACCAT TACTGTCCGG TACCCTGTTA GCCGATATAG GAGGCACGCC GATCGGTGCG
CCGGAATTTG GCGATCTTGA GCAGGCCTGA
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| Protein sequence | MAIAMTLESF LNNNKVKYSL VKHRKTLSSL DSSASAHLPS SQVVKAVLLV NNDGDYLMAG
VGSGHRLSVL KVSEQMGEAY HLADEDELSS QFSDCVEGAI PGLAEAYGLK MMLDKRLFDE
EKVYLEAGDH RHLIEINHQQ YTPLLSGTLL ADIGGTPIGA PEFGDLEQA
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