Gene Ssed_2655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2655 
Symbol 
ID5612600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3211776 
End bp3212276 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content49% 
IMG OID640933574 
ProductCreA family protein 
Protein accessionYP_001474390 
Protein GI157375790 
COG category[S] Function unknown 
COG ID[COG3045] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.546871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.237745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT TGACGACACT CGGCAAAATA ACCTCTGCAC TCATTTTGCT GGGAGGCCTG 
AGTGCCTGCG GCGATGATGT CGGTAAAGTC AGCCTGGGGC TCTTTACCAC TAAAGATGTG
ATTATCGACG CCAAACAAGA TCCCAAAATT GCTGGTGTCA CCTGTCATAT CAGCCGTGTC
GAAGCCAACC TAAGCTTGGC CGATCCCTCT GACATGAGTA TCTCTTGCAG ACAGACCGGA
CCTATCTCGG CGATGGATAT TGCCAATATC GACAGGAGTA AGAATGGCGA GATTGTCTTT
AAACAGTCTC TCAGCATCTT GTTTAAGACC CTAAAAGTGC GTCGTATCTA TGATGCAGAT
AATCAGACGT TACTCTATCT CTCATATTCG ACCAAAGAGA CCGAGGGCAG CCACAAACAC
GCTCTGTCGA CCGTGCCTCT CTATGGCACA GATGCGTGGA TACAATCCGG TGTGCCGATT
GAAAAGGTTG AGGCGCTGTA A
 
Protein sequence
MKVLTTLGKI TSALILLGGL SACGDDVGKV SLGLFTTKDV IIDAKQDPKI AGVTCHISRV 
EANLSLADPS DMSISCRQTG PISAMDIANI DRSKNGEIVF KQSLSILFKT LKVRRIYDAD
NQTLLYLSYS TKETEGSHKH ALSTVPLYGT DAWIQSGVPI EKVEAL