| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2649 |
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| Symbol | |
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| ID | 5612682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3203691 |
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| End bp | 3204698 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933568 |
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| Product | aminodeoxychorismate lyase |
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| Protein accession | YP_001474384 |
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| Protein GI | 157375784 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.108193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TTATTATAGC GCTTGTCGCA ACCAGCTTAA CTCTGCTTAC CCTCGCTGGT
GGGATTGGTT TTTGGGGTTA TAAACATATA ATCGAGTATA GTCAGTCTCC GCTGAGCGTC
GCTCAGCCAC AAGATCTTGA ACTCAAACGC GGTACCTCAT TTTCACAGCT GGTGACGACG
TTGGAGAAAC GGGAAATAGT GACCGAGGGC TGGAAGTTGA AGGTATTGGC TCGTCTTAAA
CCAGAACTTG CTAAAATTCG CTCAGGATTT TACGTTATAG AGCCCGGTGA GACAGTTAAC
GAACTGCTTG AAAAGTTGGT TGAGGGAAAA GAGAAAGTCT TCAGTGTGAC GCTTATAGAG
GGGCAGAGCA TCAAGGAGTG GTTGGCGATA TTGGAAGCCT TACCTCAAAG TCAGTTTGTT
GATGATGTAT TCAGGCGCGT TTTAGCCGAT CAGGGAGATG AGTCAGGTCT GCCTGAAGGT
AAATTTTATC CCGACACTTA TCACTATGTT GCCGGTGATG ATATTCAATT GGTGGTTACT
CAAAGTTATA ACAAGATGCA GCAAGAGTTA GCCGCCGCCT GGGCGCAACG GGCTGAGGAC
CTTCCCCTTA AGTCTCCTTA TGAGTTATTG ATCATGGCAT CGATAATTGA AAAAGAGACT
GGCAAGGCCA GCGAACGTCC CTGGATATCG GCAGTATTTG CTAACCGCCT CAATAAAGGG
ATGCGCTTAC AAACCGATCC GACCGTGATT TACGGCATGG GAGAAAGGTA CCAAGGCAAT
ATTACGCGCA AGGACTTAAG AGAGCTAACC CCCTTTAATA CTTATAGAAT TAATGGGCTG
ACGCCAACTC CCATTGCGGC GCCAAGTGGC GCATCGCTGC TTGCTGCGGC GCAACCGGCA
GACGTAAACT ACCTCTATTT TGTTTCCAGA AATGATGGCA GTCACGTATT TTCAAGAACA
TTAGTCGAGC ACAACCGTGC CGTAAACAAG TATCAGAGAA ATCGATGA
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| Protein sequence | MKKIIIALVA TSLTLLTLAG GIGFWGYKHI IEYSQSPLSV AQPQDLELKR GTSFSQLVTT
LEKREIVTEG WKLKVLARLK PELAKIRSGF YVIEPGETVN ELLEKLVEGK EKVFSVTLIE
GQSIKEWLAI LEALPQSQFV DDVFRRVLAD QGDESGLPEG KFYPDTYHYV AGDDIQLVVT
QSYNKMQQEL AAAWAQRAED LPLKSPYELL IMASIIEKET GKASERPWIS AVFANRLNKG
MRLQTDPTVI YGMGERYQGN ITRKDLRELT PFNTYRINGL TPTPIAAPSG ASLLAAAQPA
DVNYLYFVSR NDGSHVFSRT LVEHNRAVNK YQRNR
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